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berkeley_reactor_200306_biofilm_scaffold_157852_18

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(18227..19546)

Top 3 Functional Annotations

Value Algorithm Source
2,2-dialkylglycine decarboxylase (EC:4.1.1.64) similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 426.0
  • Bit_score: 458
  • Evalue 1.20e-126
2,2-dialkylglycine decarboxylase n=1 Tax=Variovorax paradoxus RepID=UPI000366D410 similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 417.0
  • Bit_score: 575
  • Evalue 3.20e-161
2,2-dialkylglycine decarboxylase {ECO:0000313|EMBL:KGE85642.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 435.0
  • Bit_score: 511
  • Evalue 6.10e-142

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Taxonomy

Phaeodactylibacter xiamenensis → Phaeodactylibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1320
ATGTCGATGCCGCATGCCAGCAACGAGCCGTGGGACCAGCATCTCATCCACTACGGCATGCCGTTCGCGCCGCGCCTGATCGCCAAGGCGCGCGGCACGCTCCTGTGGGACAGCGAGGGGCGCGAGATCCTGGATTTCACCTCGGGCCAGATGTGCGCGACCCTCGGCCACAATCATCCGCGCATCGTCCAGGCGATCCGCGAAGCCTGCGAGGGCGCGCTGCACCTGTTCAGCGGCATGCTGAGCCCGTCTGTGGTGGCGCTGTCGCAGCGGCTGGCGCGCATGCTGCCGCCTCACCTCTCGCGCTCGCTGTTCCTGTCGACCGGTGCCGAGGCGAACGAAGCCGCGCTCAAGCTCGCCAAGATGCACACCGGCGGGTTCGAGGTCGTGGGCTTCACCGGCGCCTGGCATGGCATGACCTCGGGCGCCCAGTCGGTAAACTATGTCGCCGGCCGCAAGGGCTACGGCCCGATGATGCCGGGGTCCCTCATCCTGCCGGCGCCCAACGCCTATCACTGCCCGGTGCGCCATTGCCGGAACGCCTGCGACGGCACCTGCCTCACGGTCGGCTTCGAGATGGTCGACGCCCAGTCCACCGGCGCGCCGGCGGCCCTGATCGCCGAGCCGATCGAAAGCTCCGGCGGCATCATCGTGCCGCCAGACGGCTATTGGCGCGAGGTCAAGCAGCAGTGCGAGAAGCGCGGCATGCTGCTGATCTTCGACGAGGCGCAGACTGCCTTCGGCCGCCTGGGCTGCGACTTCGCCTTCCAGCATTTCGGTGTCGAGCCTGACGTCCTGACCCTGTCGAAGACGCTGGGCGGCGGCCTGCCGCTCGCGGCCGCCGTGATCTCCGACGAGATGGACGCCAACTGCCATGCCAAGGGCTTCGTCCACGTGACCTCGCACGTCTCCGACCCCCTGCCCGCCCATGTCGGGCTGGCGGTGCTGGACGTGCTGGCCGAGGAGAACCTCAACGCCCGCGCGCTCGAGATGGGCGAGGTGCTGAGCGCCGGGCTGCGCTGGCTGCAGGAGCGCCACGAGATCATCGGCGACGTCCGCGGCTTCGGGCTGCTGCAGGGCGTCGAGCTGGTGAAGGACCGCGAGACCCGCGCGCCCGACGCCGAGACCGGACGCGCCATCACCCGCCGCTGCATGGAGCTGGGCCTGTCGATGAACATCGTCTCGGTCGGGGCGATGGCGGCGATCTGGCGCATCGCCCCGCCGCTGACCGTGAGCCGGGCCGAGCTCGACCGCGGCCTCGCCATCCTCGACCAGGCGATCACCGACGTGCTGGCCGGAGACGCGCCCGCGCCGGGCTGA
PROTEIN sequence
Length: 440
MSMPHASNEPWDQHLIHYGMPFAPRLIAKARGTLLWDSEGREILDFTSGQMCATLGHNHPRIVQAIREACEGALHLFSGMLSPSVVALSQRLARMLPPHLSRSLFLSTGAEANEAALKLAKMHTGGFEVVGFTGAWHGMTSGAQSVNYVAGRKGYGPMMPGSLILPAPNAYHCPVRHCRNACDGTCLTVGFEMVDAQSTGAPAALIAEPIESSGGIIVPPDGYWREVKQQCEKRGMLLIFDEAQTAFGRLGCDFAFQHFGVEPDVLTLSKTLGGGLPLAAAVISDEMDANCHAKGFVHVTSHVSDPLPAHVGLAVLDVLAEENLNARALEMGEVLSAGLRWLQERHEIIGDVRGFGLLQGVELVKDRETRAPDAETGRAITRRCMELGLSMNIVSVGAMAAIWRIAPPLTVSRAELDRGLAILDQAITDVLAGDAPAPG*