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berkeley_reactor_200306_biofilm_scaffold_157852_25

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 23418..24494

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZET6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 51.8
  • Coverage: 363.0
  • Bit_score: 331
  • Evalue 8.60e-88
Uncharacterized protein {ECO:0000313|EMBL:KJC36236.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 362.0
  • Bit_score: 361
  • Evalue 8.30e-97
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 363.0
  • Bit_score: 331
  • Evalue 2.40e-88

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Taxonomy

Bradyrhizobium sp. LTSP885 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1077
ATGGTCGCCGTCGTTTATTTGCGCGATCGTCCCGAGGTGATCGCGGCGCGTATCAGCGCCTCGCTGGCCGGTGCGGGCGCCGCCTCTGCCATCGTCGGGGCGCCGGGCTTCCCAGCGGAATGGCATTGGTGGAGCCTGCCTCTGATTGCGCTATCGGCGAGTGGACCGATCGCTTTCTGGCTCTGGGCTCGAGTGGCTTTCGACGACGATTTTGTCTTCCGGCCCTGGTATGCCGGCATATGGGGCGCTCTGGTCGGCCTGACGCTCGCTGCTTCCTGCGGGGTTGTCACGGGCGCCGCAGCTTCGGTGCTCGACCGGGGCCTGACGTTCTCCGATCTGGGCCTCGCGGTGCTCGCGGTGGCTCGGACGTTCGCCACCTGGCGAATGGATCTGGTCGCCCGGCGTCGCCGGCTGCGCGTTGCCGTGCTGATCGGGACGCTGGCCTATATTGCGATGAACGCGGCCGCGAATCTCTCCTCCGTCGCCATCCCGGCATGGCCCTCCTTGGTCCGAAACCTCGCCGACGCGCTCGGTCTTTGCCTGTTGGCGGCCCTCGCCAGTTGGGACTTGTTCCGCGCGGCTACAATCGGTCCGGCACTCACCCCCGCGCTGGCCGGCATGGCCGCCGACCGACGTTCGTCTGCTCCAGTCAAGGACGATGATCGCCCGGCGATCGAACCGGCACTGCTCAATCGTCTGGAGAGGCTGATGACGGCCGAGCGCGCCTATCGCCGCGAGGGCCTGACCATCGGCTCTCTCGCCGCGCTGATGAGCCTGCCGGAATATCGGCTGCGGCAGGTCATCAACGAGGGGCTCGGCCACCGCAATTTCAACGCCTTTCTCAACCGCTATCGGATCGACGAGGCCAAGACGGCTCTCGCCGATGCCGGCCAAAAGGATGTGCCGGTCCTGACGATCGCCATGGACGCCGGCTTCCAGTCGCTCGGGCCGTTCAACCGCGCCTTCAAGGCAGACACCGGCCTGACGCCGACCGAGTTTCGTCGTCTCGCTCTCGCCAAGGCGCTGTCTAAACCGCTGAGCGAAGTGCGGAATTTTGAAATCGGCGAGCCGCGTTGA
PROTEIN sequence
Length: 359
MVAVVYLRDRPEVIAARISASLAGAGAASAIVGAPGFPAEWHWWSLPLIALSASGPIAFWLWARVAFDDDFVFRPWYAGIWGALVGLTLAASCGVVTGAAASVLDRGLTFSDLGLAVLAVARTFATWRMDLVARRRRLRVAVLIGTLAYIAMNAAANLSSVAIPAWPSLVRNLADALGLCLLAALASWDLFRAATIGPALTPALAGMAADRRSSAPVKDDDRPAIEPALLNRLERLMTAERAYRREGLTIGSLAALMSLPEYRLRQVINEGLGHRNFNAFLNRYRIDEAKTALADAGQKDVPVLTIAMDAGFQSLGPFNRAFKADTGLTPTEFRRLALAKALSKPLSEVRNFEIGEPR*