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berkeley_reactor_200306_biofilm_scaffold_157852_28

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 27567..28271

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional regulator n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P5M0_AZOS1 similarity UNIREF
DB: UNIREF100
  • Identity: 35.6
  • Coverage: 233.0
  • Bit_score: 145
  • Evalue 4.40e-32
Putative Uncharacterized HTH-type transcriptional regulator in unstable DNA locus {ECO:0000313|EMBL:CDX36126.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.1
  • Coverage: 226.0
  • Bit_score: 219
  • Evalue 2.60e-54
HTH-type transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 35.6
  • Coverage: 233.0
  • Bit_score: 145
  • Evalue 1.20e-32

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Taxonomy

Mesorhizobium sp. ORS3359 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGCCGTTAGATCTCGCCCCAGCCAGCCTGGCCAGCACCGAGCGCCGCGACACCATCGCCGAGCGCGCCTATGACCGTATCCGCGAGGCGATCGTCACCACGGCGATCAGGCCGGGCACCCGCGTCTCCGAATCGGAGGTGGCCGAGACCTTCTCGGTCAGCCGCACGCCGGTGCGCGAGGCGTTCAAGCGCCTGCAGGACGAGGGGCTGATCGAGATCGCGCCGCAGGGCGGCACACGGGTGTCGCGCGTCAGCTTCGGCAAGGTGAAGCAGGCGGTGTTCGTGCGCGCCGCGGTGGAGAGCACGGTGGTGCGTCGGGCCGGGGCGACGCCGACGCTGGCGCAGATCGAGGAGCTGGACGCCTGCCTCAGGCGCCAGAAGCAGGCCGTCGGCGCCGGCGATCTCCTGACGATGCACCGGGAGGACATGGAGTTCCACCGCCAGCTGATGGCGGCCTACGGCCATCCCGTCGCCTGGACCGCCTGCCAGTTCATCACCGCCGACATGGCCCGCATCGAGTTCCTCGTCGGCCTGGAGAAGCCGCACCTCGCCGCCGTGATGCGCGAGCACCAGGCGGTGCTGCGCCATGTCCGGGCCAACGACCGGGAGGCGGCCGCCGACGCGCTGCAGGCGCATATCCGCAACCTCGAGTTCGACCAGTCGGTGATGGCCGACAAGAGCGCCGCCTATTTCGACATGAGCTGA
PROTEIN sequence
Length: 235
MPLDLAPASLASTERRDTIAERAYDRIREAIVTTAIRPGTRVSESEVAETFSVSRTPVREAFKRLQDEGLIEIAPQGGTRVSRVSFGKVKQAVFVRAAVESTVVRRAGATPTLAQIEELDACLRRQKQAVGAGDLLTMHREDMEFHRQLMAAYGHPVAWTACQFITADMARIEFLVGLEKPHLAAVMREHQAVLRHVRANDREAAADALQAHIRNLEFDQSVMADKSAAYFDMS*