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berkeley_reactor_200306_planktonic_scaffold_83130

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_83130_1
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(89..871)
DNA (783bp) protein (261aa)
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DNA8_SINAD
cobalamin/Fe3+-siderophore ABC transporter ATPase
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component {ECO:0000313|EMBL:AGA30323.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_83130_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(868..1887)
DNA (1020bp) protein (340aa)
ABC-type Fe3+-siderophore transport system, permease component n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DM33_SINAD
Fe3+-siderophore ABC transporter permease
ABC-type Fe3+-siderophore transport system, permease component {ECO:0000313|EMBL:AGA30322.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_83130_3
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1884..2750)
DNA (867bp) protein (289aa)
ABC-type Fe3+-hydroxamate transport system, periplasmic component n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DNQ6_SINAD
Fe3+-hydroxamate ABC transporter substrate-binding protein
ABC-type Fe3+-hydroxamate transport system, periplasmic component {ECO:0000313|EMBL:AGA30321.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_83130_4
unknown

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comp(3269..4165)
DNA (897bp) protein (299aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_83130_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

4213..4962
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8Z2_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA25111.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_83130_6
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5380..6354
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8B3_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA25110.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_83130_7
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(6468..6824)
DNA (357bp) protein (119aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D5Q0_SINAD
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AGA24587.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_83130_8
unknown

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comp(7135..8121)
DNA (987bp) protein (329aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_83130_9
unknown

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comp(8118..8846)
DNA (729bp) protein (243aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_83130_10
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

9095..10234
DNA (1140bp) protein (380aa)
Uncharacterized protein n=2 Tax=Singulisphaera acidiphila RepID=L0DDC7_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA26855.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_83130_11
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

10403..11734
DNA (1332bp) protein (444aa)
Outer membrane protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DLK3_SINAD
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGA30269.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_83130_12
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11854..12552)
DNA (699bp) protein (233aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQI2_SINAD
methylase
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AGA31170.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_83130_13

Not on your lists

comp(12625..15015)
DNA (2391bp) protein (797aa)
sulfatase (EC:3.1.6.1)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00037E6719
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49436.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
berkeley_reactor_200306_planktonic_scaffold_83130_14
unknown

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15407..15760
DNA (354bp) protein (118aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_83130_15
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(15929..17371)
DNA (1443bp) protein (481aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQJ8_SINAD
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA31218.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_83130_16
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(17567..19348)
DNA (1782bp) protein (594aa)
Protein kinase family protein n=2 Tax=Singulisphaera acidiphila RepID=L0DLR9_SINAD
protein kinase family protein
Protein kinase family protein {ECO:0000313|EMBL:AGA29788.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_83130_17
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

19607..20257
DNA (651bp) protein (217aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DKJ5_SINAD
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA29787.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_83130_18
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

20867..22243
DNA (1377bp) protein (459aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000346500F
putative excinuclease ATPase subunit
Putative excinuclease ATPase subunit {ECO:0000313|EMBL:BAF99949.1}; TaxID=449447 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa (strain NIES-843).;"
berkeley_reactor_200306_planktonic_scaffold_83130_19
unknown

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22244..22798
DNA (555bp) protein (185aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_83130_20
unknown

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22785..23297
DNA (513bp) protein (171aa)

This feature has no annotations

Displaying 20 items

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