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berkeley_reactor_200306_planktonic_scaffold_153662

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_153662_1
unknown

Not on your lists

comp(3..86)
DNA (84bp) protein (28aa)
transposase family protein
berkeley_reactor_200306_planktonic_scaffold_153662_2
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(310..1698)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NXV1_9DELT
hypothetical protein
Tax=RBG_13_Nitrospirae_39_12_curated
berkeley_reactor_200306_planktonic_scaffold_153662_3
Candidatus Burkholderia kirkii, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1685..2911)
DNA (1227bp) protein (409aa)
Iron-sulfur cluster-binding protein, rieske family/carboxynorspermidine decarboxylase n=1 Tax=Candidatus Burkholderia kirkii UZHbot1 RepID=G4M3V6_9BURK
Iron-sulfur cluster-binding protein, rieske family/carboxynorspermidine decarboxylase {ECO:0000313|EMBL:CCD35833.2}; TaxID=1055526 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Candidatus Burkholderia kirkii UZHbot1.;"
pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
berkeley_reactor_200306_planktonic_scaffold_153662_4
Caenorhabditis elegans, Caenorhabditis, Rhabditida, Chromadorea, Nematoda, Metazoa

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3295..4206
DNA (912bp) protein (304aa)
Protein Y39B6A.1 n=1 Tax=Caenorhabditis elegans RepID=Q9NES7_CAEEL
Y39B6A.1 {ECO:0000313|EMBL:CAC51077.1}; TaxID=6239 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.;" source="Caenorhabditis elegans.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_153662_5
Pseudanabaena biceps, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4281..5861
DNA (1581bp) protein (527aa)
hypothetical protein n=1 Tax=Geitlerinema sp. PCC 7105 RepID=UPI00037A66EC
HEAT-repeat-containing PBS lyase
HEAT domain containing protein {ECO:0000313|EMBL:ELS31979.1}; Flags: Precursor;; TaxID=927668 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" source="Pseudanabaena biceps PCC 7429.;"
berkeley_reactor_200306_planktonic_scaffold_153662_6
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6170..7195
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DDR5_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27519.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_153662_7
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(7440..10439)
DNA (3000bp) protein (1000aa)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Singulisphaera acidiphila RepID=L0DF88_SINAD
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:AGA27520.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
ribonucleoside-diphosphate reductase
berkeley_reactor_200306_planktonic_scaffold_153662_8
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists


comp(11035..11352)
DNA (318bp) protein (106aa)
50S ribosomal protein L21 n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DDS4_SINAD
50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_153662_9
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11678..15094)
DNA (3417bp) protein (1139aa)
Ribonuclease G and E n=2 Tax=Singulisphaera acidiphila RepID=L0DF99_SINAD
Ribonuclease G and E {ECO:0000313|EMBL:AGA27530.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
ribonuclease G and E
berkeley_reactor_200306_planktonic_scaffold_153662_10
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(15246..15920)
DNA (675bp) protein (225aa)
Radical SAM-linked protein n=2 Tax=Singulisphaera acidiphila RepID=L0DFU5_SINAD
radical SAM-linked protein
Radical SAM-linked protein {ECO:0000313|EMBL:AGA27531.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_153662_11
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(16154..18073)
DNA (1920bp) protein (640aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DE54_SINAD
phosphoenolpyruvate-protein phosphotransferase
berkeley_reactor_200306_planktonic_scaffold_153662_12
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(18070..18381)
DNA (312bp) protein (104aa)
Phosphotransferase system HPr (HPr) family protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFD9_SINAD
phosphotransferase system HPr (HPr) family protein
Phosphotransferase system HPr (HPr) family protein {ECO:0000313|EMBL:AGA27533.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_153662_13
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(18615..19085)
DNA (471bp) protein (157aa)
Phosphotransferase system mannitol/fructose-specifc IIA component (Ntr-type) n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DDS8_SINAD
phosphotransferase system mannitol/fructose-specifc IIA component (Ntr-type)
Phosphotransferase system mannitol/fructose-specifc IIA component (Ntr-type) {ECO:0000313|EMBL:AGA27534.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_153662_14
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(19264..19623)
DNA (360bp) protein (120aa)
Ribosomal subunit interface protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFA4_SINAD
ribosomal subunit interface protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:AGA27535.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_153662_15
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

19990..21351
DNA (1362bp) protein (454aa)
Nitrate/nitrite transporter n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8X7_SINAD
nitrate/nitrite transporter
Nitrate/nitrite transporter {ECO:0000313|EMBL:AGA25320.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_153662_16
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

21793..23442
DNA (1650bp) protein (550aa)
L-lactate transport n=1 Tax=Singulisphaera acidiphila RepID=UPI00036CD4D6
L-lactate transport
L-lactate transport {ECO:0000313|EMBL:AGA27536.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_153662_17
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(23676..23915)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DE60_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27537.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_153662_18
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

24246..24749
DNA (504bp) protein (168aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Phosphoesterase, MJ0936 family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFE5_SINAD
phosphoesterase
berkeley_reactor_200306_planktonic_scaffold_153662_19
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

24936..26282
DNA (1347bp) protein (449aa)
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DDT3_SINAD
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase {ECO:0000313|EMBL:AGA27539.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_153662_20
unknown

Not on your lists

26656..27495
DNA (840bp) protein (280aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_153662_21
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(27849..28991)
DNA (1143bp) protein (381aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DAQ4_SINAD
prepilin-type N-terminal cleavage/methylation domain-containing protein
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:AGA25756.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_153662_22
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29675..30175)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Rivularia sp. PCC 7116 RepID=K9RJV7_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KHD11032.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_153662_23
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

30381..31340
DNA (960bp) protein (320aa)
DMT(Drug/metabolite transporter) superfamily permease n=2 Tax=Singulisphaera acidiphila RepID=L0DFA8_SINAD
DMT(drug/metabolite transporter) superfamily permease
DMT(Drug/metabolite transporter) superfamily permease {ECO:0000313|EMBL:AGA27540.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_153662_24
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(31415..32611)
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Singulisphaera acidiphila RepID=UPI0002470F6B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27541.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_153662_25
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

33074..34210
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DE63_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27542.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_153662_26
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

34306..35313
DNA (1008bp) protein (336aa)
Phosphoglycerate dehydrogenase-like oxidoreductase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFE8_SINAD
phosphoglycerate dehydrogenase-like oxidoreductase
Phosphoglycerate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:AGA27543.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_153662_27
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35454..35789)
DNA (336bp) protein (112aa)
Transglycosylase-associated protein n=2 Tax=Burkholderia RepID=I5CFH5_9BURK
Transglycosylase-associated protein {ECO:0000313|EMBL:EIM94643.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
transglycosylase
berkeley_reactor_200306_planktonic_scaffold_153662_28
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(35865..36383)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TJF3_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY82154.1}; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata PCC 6304.;"
berkeley_reactor_200306_planktonic_scaffold_153662_29
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(36401..37249)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI0002FA4848
Uncharacterized protein {ECO:0000313|EMBL:KIY12024.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_153662_30
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

37621..38199
DNA (579bp) protein (193aa)
Glycine cleavage system regulatory protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQL7_SINAD
glycine cleavage system regulatory protein
Glycine cleavage system regulatory protein {ECO:0000313|EMBL:AGA31225.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying items 1-30 of 32 in total

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