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berkeley_reactor_200306_planktonic_scaffold_243330

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_243330_1
unknown

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2..118
DNA (117bp) protein (39aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_243330_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(324..1508)
DNA (1185bp) protein (395aa)
Thiol-disulfide isomerase-like thioredoxin n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9J1_SINAD
thiol-disulfide isomerase-like thioredoxin
Thiol-disulfide isomerase-like thioredoxin {ECO:0000313|EMBL:AGA25498.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_243330_3

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comp(1715..2044)
DNA (330bp) protein (110aa)
Putative integron gene cassette protein n=1 Tax=uncultured bacterium RepID=B7VDR1_9BACT
Putative integron gene cassette protein {ECO:0000313|EMBL:CAS02765.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
berkeley_reactor_200306_planktonic_scaffold_243330_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2080..2877)
DNA (798bp) protein (266aa)
phosphohydrolase n=1 Tax=Schlesneria paludicola RepID=UPI00029A7273
Metal dependent phosphohydrolase {ECO:0000313|EMBL:EEF62194.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
metal dependent phosphohydrolase
berkeley_reactor_200306_planktonic_scaffold_243330_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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3040..5928
DNA (2889bp) protein (963aa)
Membrane protein involved in colicin uptake n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DPT4_SINAD
colicin uptake protein
Membrane protein involved in colicin uptake {ECO:0000313|EMBL:AGA31262.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_243330_6
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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6105..7619
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQM5_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA31263.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_243330_7
Nostoc sp. PCC 7107, Nostoc, Nostocales, Cyanobacteria, Bacteria

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7871..8173
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002D5653C
hypothetical protein
Uncharacterized protein family UPF0150 {ECO:0000313|EMBL:AFY44865.1}; TaxID=317936 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. PCC 7107.;"
berkeley_reactor_200306_planktonic_scaffold_243330_8
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(8712..10286)
DNA (1575bp) protein (525aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9M0_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA25346.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_243330_9
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(10461..10859)
DNA (399bp) protein (133aa)
Thioredoxin domain-containing protein n=2 Tax=Singulisphaera acidiphila RepID=L0DPJ9_SINAD
thioredoxin domain-containing protein
Thioredoxin domain-containing protein {ECO:0000313|EMBL:AGA30745.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying 9 items

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