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berkeley_reactor_200306_planktonic_scaffold_269592

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_269592_1
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(600..1919)
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00030E8297
Type III iodothyronine deiodinase {ECO:0000313|EMBL:EMI17677.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_269592_2
unknown

Not on your lists

comp(1921..2220)
DNA (300bp) protein (100aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_269592_3
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2695..3639)
DNA (945bp) protein (315aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DDW6_SINAD
prepilin-type N-terminal cleavage/methylation domain-containing protein
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:AGA26851.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_269592_4
unknown

Not on your lists

comp(3870..4544)
DNA (675bp) protein (225aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_269592_5
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4580..5110
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F5A6CA
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEE52477.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
berkeley_reactor_200306_planktonic_scaffold_269592_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

5287..6537
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4M4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18477.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
berkeley_reactor_200306_planktonic_scaffold_269592_7
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6903..7295
DNA (393bp) protein (131aa)
CopY family transcriptional regulator n=1 Tax=Schlesneria paludicola RepID=UPI00029A0A2C
CopY family transcriptional regulator
Transcriptional repressor, CopY family {ECO:0000313|EMBL:ADY61471.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
berkeley_reactor_200306_planktonic_scaffold_269592_8
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

7297..10080
DNA (2784bp) protein (928aa)
peptidase M56 BlaR1 n=1 Tax=Schlesneria paludicola RepID=UPI00029A20BC
peptidase M56 BlaR1
Peptidase M56 BlaR1 {ECO:0000313|EMBL:ADY61470.1}; Flags: Precursor;; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
berkeley_reactor_200306_planktonic_scaffold_269592_9
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

10077..12470
DNA (2394bp) protein (798aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A8632
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA30097.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_269592_10
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

12731..13996
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F03A89
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY60832.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
berkeley_reactor_200306_planktonic_scaffold_269592_11
unknown

Not on your lists

comp(14007..15653)
DNA (1647bp) protein (549aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_269592_12
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

16028..17065
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DA33_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA25725.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_269592_13
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

17176..18141
DNA (966bp) protein (322aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D724_SINAD
prepilin-type N-terminal cleavage/methylation domain-containing protein
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:AGA24638.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_269592_14
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

18153..19193
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D908_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA25727.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_269592_15
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(19222..19686)
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Singulisphaera acidiphila RepID=L0DP96_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA31082.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_269592_16
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

comp(19792..20184)
DNA (393bp) protein (131aa)
HEAT-repeat-containing PBS lyase n=1 Tax=Anabaena sp. 90 RepID=K7VU32_9NOST
HEAT-repeat-containing PBS lyase
Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
berkeley_reactor_200306_planktonic_scaffold_269592_17
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(20212..21243)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R5P2_ISOPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV61791.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
berkeley_reactor_200306_planktonic_scaffold_269592_18
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

21978..23021
DNA (1044bp) protein (348aa)
ABC-type Fe3+ transport system, periplasmic component n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJR2_SINAD
Fe3+ ABC transporter substrate-binding protein
ABC-type Fe3+ transport system, periplasmic component {ECO:0000313|EMBL:AGA29085.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_269592_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23160..23843
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000376E890
Uncharacterized protein {ECO:0000313|EMBL:KFC64634.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_269592_20
unknown

Not on your lists

23924..24823
DNA (900bp) protein (300aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_269592_21
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

24826..25884
DNA (1059bp) protein (353aa)
ABC-type Fe3+ transport system, periplasmic component n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DAL5_SINAD
Fe3+ ABC transporter substrate-binding protein
ABC-type Fe3+ transport system, periplasmic component {ECO:0000313|EMBL:AGA26409.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_269592_22
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

25881..27569
DNA (1689bp) protein (563aa)
ABC-type Fe3+ transport system, permease component n=2 Tax=Singulisphaera acidiphila RepID=L0DC58_SINAD
Fe3+ ABC transporter permease
ABC-type Fe3+ transport system, permease component {ECO:0000313|EMBL:AGA26408.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying 22 items

View Taxonomy