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berkeley_reactor_200306_planktonic_scaffold_198485

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_198485_1
unknown

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comp(2..79)
DNA (78bp) protein (26aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_198485_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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1875..4721
DNA (2847bp) protein (949aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DKL4_SINAD
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA29211.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_198485_3
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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5073..5591
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CNX1_DESK7
hypothetical protein
Tax=RBG_13_Planctomycetes_62_9_curated
berkeley_reactor_200306_planktonic_scaffold_198485_4
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

5604..6950
DNA (1347bp) protein (449aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67TG7_SYMTH
hypothetical protein
Tax=RBG_13_Planctomycetes_62_9_curated
berkeley_reactor_200306_planktonic_scaffold_198485_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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7140..8291
DNA (1152bp) protein (384aa)
ATPase component of ABC-type sugar transporter n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFE0_SINAD
sugar ABC transporter ATPase
ATPase component of ABC-type sugar transporter {ECO:0000313|EMBL:AGA27575.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_198485_6
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(8284..9549)
DNA (1266bp) protein (422aa)
RND family efflux transporter, MFP subunit n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQ64_SINAD
RND family efflux transporter MFP subunit
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:AGA30970.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_198485_7
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(9554..12823)
DNA (3270bp) protein (1090aa)
Cation/multidrug efflux pump n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DRG6_SINAD
cation/multidrug efflux pump
Cation/multidrug efflux pump {ECO:0000313|EMBL:AGA30971.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_198485_8
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(12974..13579)
DNA (606bp) protein (202aa)
Transcriptional regulator n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DNY9_SINAD
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGA30972.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_198485_9
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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14272..15681
DNA (1410bp) protein (470aa)
Ethanolamine ammonia-lyase, large subunit n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJD5_SINAD
ethanolamine ammonia-lyase large subunit
Ethanolamine ammonia-lyase, large subunit {ECO:0000313|EMBL:AGA29362.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_198485_10
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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15678..16511
DNA (834bp) protein (278aa)
Ethanolamine ammonia-lyase light chain {ECO:0000256|SAAS:SAAS00064961}; EC=4.3.1.7 {ECO:0000256|SAAS:SAAS00064958};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
ethanolamine ammonia-lyase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3A6A
ethanolamine ammonia-lyase small subunit
berkeley_reactor_200306_planktonic_scaffold_198485_11
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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16613..18196
DNA (1584bp) protein (528aa)
Amino acid transporter n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DL37_SINAD
amino acid transporter
Amino acid transporter {ECO:0000313|EMBL:AGA29361.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_198485_12
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

18312..19418
DNA (1107bp) protein (369aa)
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFY7_SINAD
xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family {ECO:0000313|EMBL:AGA27576.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_198485_13
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

19415..20026
DNA (612bp) protein (204aa)
Putative MobA-like protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DE99_SINAD
MobA-like protein
Putative MobA-like protein {ECO:0000313|EMBL:AGA27577.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_198485_14
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

20126..20395
DNA (270bp) protein (90aa)
Molybdopterin converting factor, subunit 1 n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFI3_SINAD
molybdopterin converting factor subunit 1
Molybdopterin synthase sulfur carrier subunit {ECO:0000256|RuleBase:RU362014}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_198485_15
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

20406..20831
DNA (426bp) protein (142aa)
Molybdopterin converting factor, large subunit n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DF00_SINAD
molybdopterin converting factor, large subunit
Molybdopterin converting factor, large subunit {ECO:0000313|EMBL:AGA27949.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_198485_16
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(21005..22402)
DNA (1398bp) protein (466aa)
Thiol-disulfide isomerase-like thioredoxin n=2 Tax=Singulisphaera acidiphila RepID=L0DDA0_SINAD
thiol-disulfide isomerase-like thioredoxin
Thiol-disulfide isomerase-like thioredoxin {ECO:0000313|EMBL:AGA26830.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_198485_17
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(22566..24197)
DNA (1632bp) protein (544aa)
sulfotransferase n=1 Tax=Schlesneria paludicola RepID=UPI00029B4F84
Sulfotransferase {ECO:0000313|EMBL:ESW83126.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
sulfotransferase
berkeley_reactor_200306_planktonic_scaffold_198485_18
unknown

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comp(24794..25690)
DNA (897bp) protein (299aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_198485_19
unknown

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comp(26507..26758)
DNA (252bp) protein (84aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_198485_20
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(26849..27337)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QYS4_ISOPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV61050.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
Displaying 20 items

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