ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_97220_16

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(15494..15973)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreA n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJE1_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 158.0
  • Bit_score: 272
  • Evalue 1.60e-70
transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 158.0
  • Bit_score: 272
  • Evalue 4.60e-71
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 158.0
  • Bit_score: 272
  • Evalue 2.30e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 480
ATGTCCACTGACCGGATCCCCATGTCGAAGGACGGCTACGACAAGCTCAAGGCCCAGCTCGATCAGATGAAAAACGAGGACATGCCCCGGATCGCCGAGCAGATTGCCCAGGCCCGGGGCTACGGCGACCTCTCCGAGAACGCCGAGTTCGACGCGGCCGTCGAGGCCCAGGGGATGCTCCAGGCCAGGATCAACGAGCTCCAGGACAAGCTCGCCCGGGCGATGATCATCGACAAGTCGACCCTGCCGACCGACCGCGTCGTCTTCGGCTCGAAGGTCCGCGTCCTCGACCTCGACCTCGACGACGAAGAAGACTTCATCCTCGTCGGCCCCGGCGAAGAGGACTACGACCAGAACAAGATCCTCCTCTCCAGCCCCATCGGACAGGGCCTGGTCGGCAAGAAGCTCGGCGAGGAAGTCGAGGTCCCCATCCCCCGAGGGACCCTGCGGCTGCGGATCATCGAGATCGGCATCGCCTGA
PROTEIN sequence
Length: 160
MSTDRIPMSKDGYDKLKAQLDQMKNEDMPRIAEQIAQARGYGDLSENAEFDAAVEAQGMLQARINELQDKLARAMIIDKSTLPTDRVVFGSKVRVLDLDLDDEEDFILVGPGEEDYDQNKILLSSPIGQGLVGKKLGEEVEVPIPRGTLRLRIIEIGIA*