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berkeley_reactor_200306_planktonic_scaffold_149613_7

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(9932..11443)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QZ20_ISOPI similarity UNIREF
DB: UNIREF100
  • Identity: 46.1
  • Coverage: 508.0
  • Bit_score: 398
  • Evalue 8.10e-108
Fis family two component sigma54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.1
  • Coverage: 508.0
  • Bit_score: 398
  • Evalue 2.30e-108
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ADV63162.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.1
  • Coverage: 508.0
  • Bit_score: 398
  • Evalue 1.10e-107

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Taxonomy

Isosphaera pallida → Isosphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1512
ATGTCCGCATCCAAGACACCCCTGATCCTGATCGCCGACGACGATCCGAATATCGTGAAGGCGCTGCAGTTCCACCTCGAGAGCTGGGGGTGCCGCGTGGCGTCGGCGGCGAACAAGGAGCAGGTCTACCGGGCGATCGACCGCGAGCCGCCGGCGGTGCTCTTGCTGGACGTCCGCTTCGGAGAACACGACGGGGTCGAGTTGCTCCAGGGCCTGACCCGGAGGGATCCCGAGTGCGCCGTGATCATGCTGACCGCTTATGGGACCATCGATAGCGCCGTGTCGGCGATGAAGCTCGGCGCGACGGATTACTTGACCAAACCCCCGGACCTCAATCGGCTCAAATTCCTGGTCGGCGAAGCGATCGCGAAGTCGGGGGAGCGTCGGCGTCCCGGCGAGACGACCTCGGGGAGTGGCGGGCCCGCCACCGGGGCGAACCCGGGCCAGGGCCCGGGACCAGCCGCGCCGGGCGAGGCGAACCCGGGGCCGTTGCTGATCGGCGGAGGGCCGGCGACCGCCCGGCTCCGCGAGCTGATCGCCGGGGTGGCCCCGACCGACGCCACCGTCCTGATCCTGGGCGAGAGCGGCACGGGCAAGGAGGTGGTCGCCCGCGCGCTGCACGCGCGGTCGAACCGGAAGGGGGGGCCGTTCGTCGCGCTCAATATGGCGGCCCTGCCCCGCGAGCTGGTCGAGAGCACGCTCTTCGGCCACGAGAAGGGGGCGTTCACGGGGGCCGACCAGCCCCAGCAAGGGTCGGTCGAGGCGGCCGACAAGGGGACTCTGTTCCTCGACGAGATCGGCGAGATGGAGGTGAACCTCCAGGCCAAGCTGCTCCGGTTCCTCCAGGAGCGGACGTTCCAACGCGTCGGCTCGAGCAAGCCGCGCCCGGTCGACGTGCGGATCGTGGCGGCGACCAACCGCGACCCGCTGGAACAGGTGCGGCTGGGGCAGCTCCGCGAGGACCTTTACTACCGGCTCAACGTCGTGCCGATCGTCCTGACCCCGTTGCGAGGTCGCCGCGAGGACATCCCCGAGCTCGCGGAGCACTTCCTTCGCCGCGTCGCCTCGCGGTACGGCAAGGCCTTCGACGGCTTCACCCCCGAGGCGCTCGACGCGCTCGCCCGGTACGACTGGCCGGGGAACGTCCGGCAGTTGGAGAACATGGTCGAGCGCCTGGCGATCTTCGGCACGGGCCCGAGGATCGGCCTGGATGCGATCCCTCCCGAAATCATGGCGGCGTCGGGGATGGGCGTCGAGACGGGGATGGGCGCGATGGCGAGGCCCCTACCCGCCGAGCCCCCGGGCCCATTCGGCCCGAGGCCTTCGGGGCCCCCGCCCCAGCCGTCGGCCCAGGGCGAGACCTTGCGGCCGATCGAGCAGATGGAGAAGCAGGCGATCGAGGAGGCCCTCCGCCAGTGCCGCGGCAACGTCCGCGAGGCGGCGCGATCGCTGGGGCTCGGCCAGGCGACCGTCTATCGCAAGATCAAGCGGTACGGGATCAACCCCGGCTGA
PROTEIN sequence
Length: 504
MSASKTPLILIADDDPNIVKALQFHLESWGCRVASAANKEQVYRAIDREPPAVLLLDVRFGEHDGVELLQGLTRRDPECAVIMLTAYGTIDSAVSAMKLGATDYLTKPPDLNRLKFLVGEAIAKSGERRRPGETTSGSGGPATGANPGQGPGPAAPGEANPGPLLIGGGPATARLRELIAGVAPTDATVLILGESGTGKEVVARALHARSNRKGGPFVALNMAALPRELVESTLFGHEKGAFTGADQPQQGSVEAADKGTLFLDEIGEMEVNLQAKLLRFLQERTFQRVGSSKPRPVDVRIVAATNRDPLEQVRLGQLREDLYYRLNVVPIVLTPLRGRREDIPELAEHFLRRVASRYGKAFDGFTPEALDALARYDWPGNVRQLENMVERLAIFGTGPRIGLDAIPPEIMAASGMGVETGMGAMARPLPAEPPGPFGPRPSGPPPQPSAQGETLRPIEQMEKQAIEEALRQCRGNVREAARSLGLGQATVYRKIKRYGINPG*