name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
berkeley_reactor_200306_planktonic_scaffold_112900_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
135..1604
|
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMU8_9BACT
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:EEF58873.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
outer membrane lipoprotein
|
|
berkeley_reactor_200306_planktonic_scaffold_112900_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
1752..2114
|
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBN4_9BACT
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EEF62919.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
glyoxalase/bleomycin resistance protein/dioxygenase
|
|
berkeley_reactor_200306_planktonic_scaffold_112900_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
2263..3162
|
PfkB domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQ77_9BACT
PfkB domain protein {ECO:0000313|EMBL:EEF57995.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ydjH; PfkB family kinase
|
|
berkeley_reactor_200306_planktonic_scaffold_112900_4
unknown
|
Not on your lists |
3536..3652
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_112900_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(3645..4427)
|
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCT8_9BACT
periplasmic solute-binding protein
|
|
berkeley_reactor_200306_planktonic_scaffold_112900_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(4424..5923)
|
Outer membrane efflux protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJM0_9BACT
Outer membrane efflux protein {ECO:0000313|EMBL:EEF59896.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
putative outer membrane efflux protein
|
|
berkeley_reactor_200306_planktonic_scaffold_112900_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(5967..7277)
|
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Trigger factor n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKB4_9BACT
trigger factor
|
|
berkeley_reactor_200306_planktonic_scaffold_112900_8
Leuconostoc kimchii, Leuconostoc, Lactobacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
7372..8088
|
bioD; dithiobiotin synthetase (EC:6.3.3.3)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; TaxID=762051 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Leuconostocaceae; Leuconostoc.;" source="Leuconostoc kimchii (strain IMSNU 11154 / KCTC 2386 / IH25).;"
ATP-dependent dethiobiotin synthetase BioD n=1 Tax=Leuconostoc kimchii (strain IMSNU 11154 / KCTC 2386 / IH25) RepID=D5T2T9_LEUKI
|
|
berkeley_reactor_200306_planktonic_scaffold_112900_9
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8160..10223)
|
TPR repeat-containing protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBT7_9BACT
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_112900_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
10314..11099
|
MotA/TolQ/ExbB proton channel n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKH6_9BACT
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:EEF59646.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
MotA/TolQ/ExbB proton channel
|
|
berkeley_reactor_200306_planktonic_scaffold_112900_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
11210..11626
|
Biopolymer transport protein ExbD/TolR n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKH5_9BACT
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:EEF59645.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
biopolymer transport protein ExbD/TolR
|
|
berkeley_reactor_200306_planktonic_scaffold_112900_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
11623..12546
|
TonB family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKH4_9BACT
TonB family protein {ECO:0000313|EMBL:EEF59644.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_112900_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
12543..13718
|
WD40 domain protein beta Propeller n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKH3_9BACT
WD40 domain protein beta Propeller {ECO:0000313|EMBL:EEF59643.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
tolB; Periplasmic component of the Tol biopolymer transport system
|
|
berkeley_reactor_200306_planktonic_scaffold_112900_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
13783..14403
|
Peptidoglycan-associated lipoprotein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKH2_9BACT
Peptidoglycan-associated lipoprotein {ECO:0000313|EMBL:EEF59642.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
peptidoglycan-associated lipoprotein
|
|
berkeley_reactor_200306_planktonic_scaffold_112900_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
14509..14781
|
Sec-independent protein translocase protein TatA n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKH1_9BACT
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
twin-arginine translocation protein TatA
|
|
berkeley_reactor_200306_planktonic_scaffold_112900_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
14802..15893
|
Sec-independent protein translocase protein TatC n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKH0_9BACT
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Sec-independent protein translocase subunit TatC
|
|
berkeley_reactor_200306_planktonic_scaffold_112900_17
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
15956..16393
|
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKG8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59638.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_112900_18
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
16460..17332
|
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKG7_9BACT
|
|
berkeley_reactor_200306_planktonic_scaffold_112900_19
uncultured bacterium, Bacteria
|
Not on your lists |
comp(17430..19001)
|
Integral membrane protein MviN n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJM6_9BACT
Integral membrane protein MviN {ECO:0000313|EMBL:AIA18464.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
mviN; membrane protein MviN
|
|
berkeley_reactor_200306_planktonic_scaffold_112900_20
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19067..20587)
|
AAA ATPase central domain protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C4F5_NITHN
ATPase AAA
AAA ATPase central domain protein {ECO:0000313|EMBL:ADE15139.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_112900_21
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
20697..21986
|
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
tyrosyl-tRNA synthase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XHF6_9BACT
|
|
berkeley_reactor_200306_planktonic_scaffold_112900_22
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(22064..22801)
|
putative Astacin (Astacus proteinase, Crayfish small-molecule proteinase) (EC:3.4.24.21)
Peptidase M12A astacin n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSD7_9BACT
Peptidase M12A astacin {ECO:0000313|EMBL:EEF57237.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_112900_23
R_Gammaproteobacteria_43_28, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22907..23125)
|
Translation initiation factor IF-1 n=1 Tax=mine drainage metagenome RepID=T1AD35_9ZZZZ
translation initiation factor IF-1
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_43_28_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_112900_24
unknown
|
Not on your lists |
23240..23506
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_112900_25
unknown
|
Not on your lists |
23511..23846
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_112900_26
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(23860..24252)
|
Lipid A biosynthesis domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPQ0_9BACT
Lipid A biosynthesis domain protein {ECO:0000313|EMBL:EEF58173.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
membrane protein
|
|
berkeley_reactor_200306_planktonic_scaffold_112900_27
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(24350..24553)
|
Thiamine biosynthesis protein ThiS n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPP0_9BACT
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:EEF58163.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
thiamine biosynthesis protein ThiS
|
|
berkeley_reactor_200306_planktonic_scaffold_112900_28
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(24821..26227)
|
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036005C9
glucose/galactose transporter
Tax=GWF2_Bacteroidetes_33_38_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_112900_29
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(26358..27776)
|
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K7R5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH00168.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
|
|
berkeley_reactor_200306_planktonic_scaffold_112900_30
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(27926..30139)
|
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK83_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59721.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
|