name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
berkeley_reactor_200306_planktonic_scaffold_198771_1
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria
|
Not on your lists |
403..1626
|
Lipoprotein n=1 Tax=Rhodopirellula sallentina SM41 RepID=M5U6Z5_9PLAN
Lipoprotein {ECO:0000313|EMBL:EMI57195.1}; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_198771_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(1773..3185)
|
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBI2_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF62867.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ECF subfamily RNA polymerase sigma-24 factor
|
|
berkeley_reactor_200306_planktonic_scaffold_198771_3
unknown
|
Not on your lists |
3466..4128
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_198771_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
4192..6372
|
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Sugar-phosphate isomerase, RpiB/LacA/LacB family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPG3_9BACT
glyA; protein-tyrosine-phosphatase, ribose 5-phosphate isomerase and glycine/serine hydroxymethyltransferase
|
|
berkeley_reactor_200306_planktonic_scaffold_198771_5
unknown
|
Not on your lists |
6469..6783
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_198771_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(6780..8516)
|
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK77_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF59715.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ECF subfamily RNA polymerase sigma-24 factor
|
|
berkeley_reactor_200306_planktonic_scaffold_198771_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(8634..9404)
|
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPR2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58185.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
N-terminal cleavage protein
|
|
berkeley_reactor_200306_planktonic_scaffold_198771_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
9775..11451
|
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Transcription termination factor Rho n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPG2_9BACT
rho; transcriptional terminator Rho
|
|
berkeley_reactor_200306_planktonic_scaffold_198771_9
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
11571..12746
|
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI0003802C85
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_198771_10
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
12794..14041
|
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000371E188
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB77676.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_198771_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
14038..15921
|
Cytochrome c assembly protein {ECO:0000313|EMBL:EEF58299.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
cytochrome c assembly protein
|
|
berkeley_reactor_200306_planktonic_scaffold_198771_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(16158..16775)
|
FHA domain containing protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKW3_9BACT
FHA domain containing protein {ECO:0000313|EMBL:EEF59457.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
FHA domain-containing protein
|
|
berkeley_reactor_200306_planktonic_scaffold_198771_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(16836..17993)
|
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Carbamoyl-phosphate synthase small chain n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKW2_9BACT
carbamoyl-phosphate synthase small subunit
|
|
berkeley_reactor_200306_planktonic_scaffold_198771_14
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
18085..18537
|
Cyclase/dehydrase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZNG3_OPITP
cyclase/dehydrase
Cyclase/dehydrase {ECO:0000313|EMBL:ACB74397.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_198771_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(18667..20487)
|
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Glutamine--tRNA ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9B1_9BACT
glutaminyl-tRNA synthetase
|
|
berkeley_reactor_200306_planktonic_scaffold_198771_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
20663..24133
|
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
two-component hybrid sensor and regulator n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017458BF
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:EEF61118.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_198771_17
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(24249..24887)
|
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
carbonate dehydratase (EC:4.2.1.1)
Carbonic anhydrase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJ14_9BACT
|
|
berkeley_reactor_200306_planktonic_scaffold_198771_18
GWC2_Elusimicrobia_56_31_curated, Elusimicrobia, Bacteria
|
Not on your lists |
comp(24889..26061)
|
hypothetical protein GobsU_17850 id=4397918 bin=GWA2_Elusimicrobia_56_46 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
Tax=GWC2_Elusimicrobia_56_31_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_198771_19
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(26131..26448)
|
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WEX8_KINRD
|
|
berkeley_reactor_200306_planktonic_scaffold_198771_20
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26539..27498)
|
Rhomboid family protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SLQ8_9RHOB
Peptidase C54 {ECO:0000313|EMBL:KGB83496.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22.;"
rhomboid family protein
|
|
berkeley_reactor_200306_planktonic_scaffold_198771_21
unknown
|
Not on your lists |
comp(27615..28226)
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_198771_22
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
28243..28842
|
pgsA_1; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-alcohol phosphatidyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJ18_9BACT
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:EEF60245.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_198771_23
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
28912..29385
|
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJ19_9BACT
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:EEF60246.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
bcp-1; bacterioferritin comigratory protein, thiol peroxidase
|
|
berkeley_reactor_200306_planktonic_scaffold_198771_24
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
29601..30080
|
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJ20_9BACT
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:EEF60247.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
alkyl hydroperoxide reductase
|
|
berkeley_reactor_200306_planktonic_scaffold_198771_25
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria
|
Not on your lists |
30207..30596
|
BlaI family transcriptional regulator id=4153633 bin=GWF2_Planctomycetes_42_9 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
putative transcriptional regulator
Tax=RBG_13_Planctomycetes_50_24_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_198771_26
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria
|
Not on your lists |
30618..34943
|
Putative uncharacterized protein id=4153632 bin=GWF2_Planctomycetes_42_9 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
antirepressor regulating drug resistance protein
Tax=RBG_13_Planctomycetes_50_24_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_198771_27
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
35342..35740
|
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00036CBF19
Response regulator receiver protein {ECO:0000313|EMBL:EEF59371.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
two component transcriptional regulator, winged helix family
|
|
berkeley_reactor_200306_planktonic_scaffold_198771_28
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
35828..38674
|
Aconitate hydratase 1 n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZUZ6_OPITP
aconitate hydratase 1
Aconitate hydratase 1 {ECO:0000313|EMBL:ACB75966.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_198771_29
uncultured bacterium, Bacteria
|
Not on your lists |
38767..39234
|
Uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DFR5_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49443.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_198771_30
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
39523..40713
|
Fmu (Sun) domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMS1_9BACT
Fmu (Sun) domain protein {ECO:0000313|EMBL:EEF58846.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
RNA methyltransferase
|