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berkeley_reactor_200306_planktonic_scaffold_162563_26

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(31838..32830)

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 329.0
  • Bit_score: 434
  • Evalue 7.10e-119
pdxA1; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262) similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 344.0
  • Bit_score: 270
  • Evalue 6.10e-70
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEU4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 64.1
  • Coverage: 329.0
  • Bit_score: 434
  • Evalue 5.10e-119

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 993
ATGAAAAACTGGATTGGCATTTCCCTTGGTGACGCCACCGGCATCAGCCCCGAAGTCACCCTCAAGGCCATCGCGTCCGCAGCGTCCGCCGACGACACAAAATATCTTCTCATCGGCGACGAAGGCGGGGTGCGGCGGCTGAACGTTTCCCTGGGATTGAATCTGCCGTTGCAGCGATTCACCGGATATGGCGGCGCGGGCAGATTTTTCATCCACCGTCCACTTTCCGAGCCGTTGCCGGAGCAGCTTCCCGCCGGTTCGCCGCTGGCCGCCAACGTGGCGGTCGCCGCATTGACGGATGGCGGACAACGTTGTTTGCGCGGCGAACTTGATGCGCTGGTCACGGCGCCGGTGAACAAGGAATCCATCATTCGCGCCGGCCACAAATTTATCGGCCAGACGGAATTTCTCTCCCAACTGGCGGGCACCCAGCGCACCGCCATGATGCTGCTCGGCACGGATGACCAAGGCCGCTGGCTGCGCGTGGCGCTGGCCACCGTTCACCTTGCCGTCAAATCCGTTCCCGGGCAATTGACCGCGGAAAAAATCACGCTCGCCGTTGAGCTTGCCGCCCAATCCTGTCGCGAGCTGGGCCTGTCGCGCTCCCGTATCGCCGTGTGCGGCTTGAATCCACACGCCGGCGAAGGCGGCCAGTTTGGCGACGAGGAAATCACCACGATCGGCCCCGCGATTCGAGCCCTGCAACAGCGCGGCGTGGACGTGGCCGGGCCGTTGAGCGGCGACACGGTTTTTTATTACGCCTTGCGCGGGGATTTTGACGCCGTCGTGGCGATGTATCACGACCAGGGGTTGGCGCCGCTGAAAGCCGTCGCGTTCGAGAGCGGCATCAACTGGACGCTGGGGCTGCCGTTCATCCGCACGTCACCCGATCACGGAACCGCTTATGACATCGCGGGAAAAGGCATCGCCAATCCGTCCAGCATGATGGCCGCCATCCGGCTGGCCAAACAACTGGCGCGGAACCGGGGCTGA
PROTEIN sequence
Length: 331
MKNWIGISLGDATGISPEVTLKAIASAASADDTKYLLIGDEGGVRRLNVSLGLNLPLQRFTGYGGAGRFFIHRPLSEPLPEQLPAGSPLAANVAVAALTDGGQRCLRGELDALVTAPVNKESIIRAGHKFIGQTEFLSQLAGTQRTAMMLLGTDDQGRWLRVALATVHLAVKSVPGQLTAEKITLAVELAAQSCRELGLSRSRIAVCGLNPHAGEGGQFGDEEITTIGPAIRALQQRGVDVAGPLSGDTVFYYALRGDFDAVVAMYHDQGLAPLKAVAFESGINWTLGLPFIRTSPDHGTAYDIAGKGIANPSSMMAAIRLAKQLARNRG*