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berkeley_reactor_200306_planktonic_scaffold_162563_27

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(32893..33849)

Top 3 Functional Annotations

Value Algorithm Source
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.6
  • Coverage: 317.0
  • Bit_score: 272
  • Evalue 5.90e-70
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEU5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 42.6
  • Coverage: 317.0
  • Bit_score: 272
  • Evalue 4.20e-70
surA; Parvulin-like peptidyl-prolyl isomerase similarity KEGG
DB: KEGG
  • Identity: 35.9
  • Coverage: 329.0
  • Bit_score: 212
  • Evalue 1.50e-52

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 957
ATGAAGGTATTACTGTTTATTCTGACGCTGCTGGCCTGCGTTCAACTGCCGGCCCTGGCGCAGCCGGCGGTGATTGACGGCGTCAAGGGCGTGGTGGCCAGCCGCATCGTCACGTTTTCCGAAGTGGAGAGTTACACGCGAACCGCCGCCGATTCGCTGCAGCGCGAATATTACGGCCAGCCGCAGGTGCTGGAGCAAAAGATGAACCAGTTGCTCAACGACGGCCTGGAGCAACTGGTCGAGCGCCTGCTGATTCTGCGTAGCTTTGACACCGAAGGCTACAAGCTGCCCGACGGTGTGGTGGACGAAATGGTGCATGAAAACGTCAAGCGGGACTTCGGCGACCGCATCACCTTCATGAAAACGCTCCAGGCGCGGGGCATGACGGTGGAGCAATACCGCAAGCAGATTCGCGATCAATACATCGAATCCGCCCTGCGCAACCAGCACGTGCAGCGCCAGATCTTCGTCTCGCCCTACAAGGTGGAAACCTATTACCAGGCGCATCAGGACGAGTTCCGGGTGGGGGACGAGGTGAAATTGCGCATGATCGTGCTGCCCAAATCCGGCGCCGATGACACCAACACGGTCAAGCTCGCCCGCGAGATTGAAACCGAGATCAAGAACGGCACGCCGTTCAAGGAAATGGCCGCCACCTATTCGCAAGGTTCCCAGCAGCATCAGGGCGGCGATTGGGGCTGGGTGGAGCGCTCCGTTCTCCGCAAGGAGCTGGCCGATGTCGCCTTCAAACTGAAACCCGGCGTGGTCAGCGATCCGGTCGAGACGGCCGACACGATCTATCTGATGATGGTGGACGATGTCCGCCCCGCGCACGTTCGGCCGTTGAACGAGGTGGAGCCGGACATTGAGAAAACGCTTCGCATCCAGGAGCAGGCCAGGCTGCAAAAGCAGTGGATTGACAGCCTGAAGAAGAAGACGTTCATCCGGTATTTTTGA
PROTEIN sequence
Length: 319
MKVLLFILTLLACVQLPALAQPAVIDGVKGVVASRIVTFSEVESYTRTAADSLQREYYGQPQVLEQKMNQLLNDGLEQLVERLLILRSFDTEGYKLPDGVVDEMVHENVKRDFGDRITFMKTLQARGMTVEQYRKQIRDQYIESALRNQHVQRQIFVSPYKVETYYQAHQDEFRVGDEVKLRMIVLPKSGADDTNTVKLAREIETEIKNGTPFKEMAATYSQGSQQHQGGDWGWVERSVLRKELADVAFKLKPGVVSDPVETADTIYLMMVDDVRPAHVRPLNEVEPDIEKTLRIQEQARLQKQWIDSLKKKTFIRYF*