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berkeley_reactor_200306_planktonic_scaffold_190120_8

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(8268..9626)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XR31_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 456.0
  • Bit_score: 715
  • Evalue 2.70e-203
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:EEF57727.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 456.0
  • Bit_score: 715
  • Evalue 3.80e-203
atoC; DNA-binding response regulator, NtrC family (contains REC, AAA-type ATPase, and DNA-binding Fis domains) similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 451.0
  • Bit_score: 507
  • Evalue 2.40e-141

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1359
ATGAAACCGACCTTGCTCATTGTGGACGACGAGAAGACGACGCGCGAAGGGTTGCGCGCGGCGTTGGAGGAGCGTTATGACGTCTATATTGCCGAGGACGCCAAGGCGGCGATGAATTTGCTGGAAACGGAGAATTTCGACGTGCTGCTCACGGATTTCCGCCTGCCGAACGAAGACGGCATGAAATTGATCGCCCGCGCCAAGTCGCTGCCCAAGCCGCCGATTTGCATTCTCATGACGGCTTACGGCTCGGAGGAAGTCGCCGTGGAGGCGATGAAACGCGGCGCGGATGATTACATCGCCAAAGGCCGGCTGCAAATTGACGAACTGGAAATGCGCATCGCCCGCGCGCTCAAACAGCAAACCCTGGAAGTGGAAAATGTTTCGCTGCGGCAACAGCTCAACGCCCGGTTCGGCCTGGAAAATATCGTCGGCGAATCGCCGGCCATGAAGGAAATTTTCGAGGTCGTGCAGCAGGTGGCGCCGACGCGGGCCACCGTGCTGGTCACCGGCGAGAGCGGCACGGGCAAGGAACTGATCGCCAAGGCGGTGCATCAGTTGAGCCCGCGCGCAAAGCAGCCGTTTGTCACCGTGCATTGCGCGGCGTTGGCACCGACGTTGCTCGAGAGCGAGTTGTTCGGCCACGAACGCGGCGCGTTCACCGGCGCGCATGAACGGCGCATCGGCCGGTTTGAGCAGGCGCAGGGCGGCACGTTGTTTCTGGATGAAATCGGGGAGATTGACGCGACGGTGCAGGTGAAGCTGCTGCGTTTTCTCGGCGAGCGCACCTTTGAGCGCGTCGGTTCCAACAAAACGCTCACCGCCGATGTCCGGCTGGTGGCGGCCACGAATAAAAATCTGGAAGAACTGGTCAAAGCGGGGAAATTCCGCGAAGATTTGTTTTTCCGGCTGCGGGTGGTGGAGATCGAACTGCCGCCGCTGCGCGAACGGAGCGGCGACATTCCCCTGCTGGCGCACAATTTTTTGCGCGAGTTCGCGAAGGAAAACGGGAAGCCGGTGACCGATTTCACCGTGGAGGCGCTGGAGACGCTCATGCACTTTTCCTGGCCGGGCAACGTGCGCGAATTGCGCACGGCCATCGAGCACGCCGTGGTGTTGTGCCGCGGCGAACGCGTCTCCGTGCGCGACCTGCCGCCGTCGGTGCGCGGCGGCGCGGCGGCGGCCGACACCAGATTGTTGCAAGGAAAAGATTTGACGATCAAGGACGCTGAGAAACAATTGATCATTCGCGCGCTGAAGGAAACGGACGGCAACCGCACGCGCGCGGCGCAAAAAATCGGCATGAGCCGGCGGACGTTCCACCGGAAGCTGCACGAGTATCATTTGGAAGGTTTTTGA
PROTEIN sequence
Length: 453
MKPTLLIVDDEKTTREGLRAALEERYDVYIAEDAKAAMNLLETENFDVLLTDFRLPNEDGMKLIARAKSLPKPPICILMTAYGSEEVAVEAMKRGADDYIAKGRLQIDELEMRIARALKQQTLEVENVSLRQQLNARFGLENIVGESPAMKEIFEVVQQVAPTRATVLVTGESGTGKELIAKAVHQLSPRAKQPFVTVHCAALAPTLLESELFGHERGAFTGAHERRIGRFEQAQGGTLFLDEIGEIDATVQVKLLRFLGERTFERVGSNKTLTADVRLVAATNKNLEELVKAGKFREDLFFRLRVVEIELPPLRERSGDIPLLAHNFLREFAKENGKPVTDFTVEALETLMHFSWPGNVRELRTAIEHAVVLCRGERVSVRDLPPSVRGGAAAADTRLLQGKDLTIKDAEKQLIIRALKETDGNRTRAAQKIGMSRRTFHRKLHEYHLEGF*