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berkeley_reactor_200306_planktonic_scaffold_190120_12

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(12808..13497)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.3
  • Coverage: 228.0
  • Bit_score: 276
  • Evalue 1.70e-71
rnc; ribonuclease III (EC:3.1.26.3) similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 234.0
  • Bit_score: 194
  • Evalue 1.70e-47
Ribonuclease 3 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XI61_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 62.3
  • Coverage: 228.0
  • Bit_score: 276
  • Evalue 1.20e-71

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 690
GTGGCTGCCTACGACGAACTTCAAGCCCGCCTCGGCCATCCATTCCGCGACACCAGCCTCCTGCGGCTCGCGCTCACGCACCCGTCCGTTTCCCACGAGCAAAATCATCCGCTGCCGCACAACCAGCGGCTGGAGTTCCTCGGCGATTCGGTGCTGGGCATCATTCTCTCCCGCGAACTTTACGAAAAATTTCCCGAAGCGGACGAAGGATCGCTGACCAAATCCCGCGCCCGGCTCGTCAACGCCGCCTCGCTGGCCGCGCACGCGCGGGCCATTGATTTGGGCGCGTATCTGCTTCTGAGCCGCGGCGAGGAAAACAGCGGCGGTCGCGACCGCGCTTCCGCGCTGGCCGACGCGTTCGAGGCTTTGCTGGGCGCCCTTTTTATTGACGGCGGCCTGGAGGTGGCGCGGGCGTTCGTGCTGCGTGAATTTACCTCCGACCTGGCGGCCTTGGAGGAACCGACCGGCATTGAAAATCCGAAAGGCGAGCTGCAGGAACTCTTGCAATCACGTTCGCCCAACGCGCCCCAATATCAACTGGTTTCCGTCAGCGGGCCGGATCACGACCGCGATTTTGAGTGCGCCGTGTCGCACGACAACGCCGAGCTGGCGCGCGGCCACGGCAAAAGCAAAAAAGCCGCCGAGAGCGACGCGGCTCTGGCGGCTTTGAAGAAGCTGCGCGGTCAGTAG
PROTEIN sequence
Length: 230
VAAYDELQARLGHPFRDTSLLRLALTHPSVSHEQNHPLPHNQRLEFLGDSVLGIILSRELYEKFPEADEGSLTKSRARLVNAASLAAHARAIDLGAYLLLSRGEENSGGRDRASALADAFEALLGALFIDGGLEVARAFVLREFTSDLAALEEPTGIENPKGELQELLQSRSPNAPQYQLVSVSGPDHDRDFECAVSHDNAELARGHGKSKKAAESDAALAALKKLRGQ*