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berkeley_reactor_200306_planktonic_scaffold_14928_7

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 4786..5145

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, MerR family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLR2_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 119.0
  • Bit_score: 177
  • Evalue 6.90e-42
MerR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 119.0
  • Bit_score: 177
  • Evalue 2.00e-42
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ACU60349.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 119.0
  • Bit_score: 177
  • Evalue 9.70e-42

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 360
ATGAGATTAATCAGCCAGCTTTCGAAGGAAACAGGCGTGCCAGTCGGCACGATCCGGTTTTATGAGCAATCGGGGCTTATCAAGGGGGAACGAAACACCGCAGTAAAGACGAATAACTACCTTTATTACGGCGACGATGTGCCGGATAAGCTGCGCTTTATACAAATGGCCAAGGATGTCGGTTTCACGCTCAACGAAATCAAAGAAGTGATCGATGCCTGGTACGAGAAAACCCTGACGCGTAAAGCCCAGATCGCGGTATTGGAAAAGAAGCTCCTGCAGATCGACGAAAAAATGCAGGAGCTGAAAGCCATGAAACGCCAGCTGGCCGTATGTATCACGAACATCAATAACCGGTAG
PROTEIN sequence
Length: 120
MRLISQLSKETGVPVGTIRFYEQSGLIKGERNTAVKTNNYLYYGDDVPDKLRFIQMAKDVGFTLNEIKEVIDAWYEKTLTRKAQIAVLEKKLLQIDEKMQELKAMKRQLAVCITNINNR*