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berkeley_reactor_200306_planktonic_scaffold_82142_4

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(6481..7827)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000381971F similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 452.0
  • Bit_score: 474
  • Evalue 6.00e-131
outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 469.0
  • Bit_score: 462
  • Evalue 1.10e-127
Outer membrane efflux protein {ECO:0000313|EMBL:AEW02039.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 469.0
  • Bit_score: 462
  • Evalue 5.70e-127

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1347
ATGAAAAGAACGATCTACATTTTACTAGTTATGGCGGGCCTGGCTGCAGGCGCTTATCGTGCTGCCGCTCAAACGCAGCCTGCGCCTGTACGGCATACTTTCTCGTTGCAGGAGGCGCTGGCCTATGCCGCCAGGAACAATGCCCAGGTCAAAAGCGCCCTGCTGGATATCAGGATACAGAAGGAGTCCAACCGCGAGGTGGCCGCCGCTGCTTATCCATCCATATCGGCCAGTGGCAGTATTACCGATAACCTCAAACTGCAGACCACCCTCCTACCCGGCGAATTCCTGGGTCAGCCGGCGGGCACTTTCGTGCCGGTAACGTTCGGTACCAAATATATTACCAGCGGCAGCATCGACCTGAGCCAGGTTGTATTCGACGGCCAGGTATTGGTAGGGCTCCAGGCCCGCAAAACATCGCTGGCGTGGAAAACCAAAAACGCGGAGATTACCGAGGAAATGATCCGTACCAATGTATATAAGGTATACTACCAGCTGGTGCTGAGCAAAACACAGATTGCCCTGCTCGATGCCAATATAGACCTGCTGAAAAAACTGAAACACGACGCGCAGATCATGTACGATAACGGCTTTGCCGAAAAACTGGATATCGATAAAAGCGATGTGCAGCTCACCAATATGGAAACCGAAAAGGAAAAAGTATTGCTTTCGGTAACCACGGGTTATAATGGTCTTAAGATCCTGCTGGGTATACCCGTGCGCGACCAGCTGGTGCTCACCGATACCCTGAGCGACGAACAGATCAAAGCAGGGGTATTGCAAACCGCCGACTTCCGCTACGAGGACCGCCGCGACTTTCAATACCTGCTCCTGTCGCGCAGGCTGAATGAGTATAACGTAAAGCGTTACCAGTACAGCAAATTGCCTTCGCTTACGCTGGCCGCCAACTATAACAAACAGATACAGCGCAACGAACTTACTTTCGACGGCGACTGGTTTACCGCTACCTATGTGGCATTACGGGTTTCATGGCCCATCTTCCGCGGCTTTGCCGCCAATGCCCGGATCAACCAGGCCAGGCTGGCAGTACAGCAAAACAATGTGCAGGTCGATAACCTGAAGCTAAGCATCGACAGCGAGATCGAAACAGCGAAGAATAATTTCAAATCGGCGGTAGCTGTTATGGACTACCAGAAGAAAAACATGGGACTGGCCGAAACCGTATACGCACAAACCAAAAAGAAATTCGAAATAGGTACCGGATCGCAGACCGAGATCAATACGGCGCAAAACGATCTTAAAACCGCACAGTCCAATTATATCAACGCATTGTACGATGCGATCGTCGCTAAAGTGGATTTCCTGAAAGCCACCGGCAAACTGTAA
PROTEIN sequence
Length: 449
MKRTIYILLVMAGLAAGAYRAAAQTQPAPVRHTFSLQEALAYAARNNAQVKSALLDIRIQKESNREVAAAAYPSISASGSITDNLKLQTTLLPGEFLGQPAGTFVPVTFGTKYITSGSIDLSQVVFDGQVLVGLQARKTSLAWKTKNAEITEEMIRTNVYKVYYQLVLSKTQIALLDANIDLLKKLKHDAQIMYDNGFAEKLDIDKSDVQLTNMETEKEKVLLSVTTGYNGLKILLGIPVRDQLVLTDTLSDEQIKAGVLQTADFRYEDRRDFQYLLLSRRLNEYNVKRYQYSKLPSLTLAANYNKQIQRNELTFDGDWFTATYVALRVSWPIFRGFAANARINQARLAVQQNNVQVDNLKLSIDSEIETAKNNFKSAVAVMDYQKKNMGLAETVYAQTKKKFEIGTGSQTEINTAQNDLKTAQSNYINALYDAIVAKVDFLKATGKL*