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berkeley_reactor_200306_planktonic_scaffold_82142_15

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 17373..17846

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 157.0
  • Bit_score: 142
  • Evalue 3.50e-31
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9R6_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 45.9
  • Coverage: 157.0
  • Bit_score: 142
  • Evalue 2.50e-31
ribosomal RNA large subunit methyltransferase H similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 157.0
  • Bit_score: 142
  • Evalue 7.00e-32

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 474
ATGAATATCGAGATCTGGTCTTTAGGTAAAGCCAACGAGGATTTTATTGCATCCGGGCTTCAATATTATTTTCAGAAAACAAAACCCTGGAATCCTGTGGAACTGGTTATTCTCCAGCTTCCCAAAAAATCATTGACCAGTGATGTGGCCCGGGCCAAACAGCAGGAGGAGGAACTGATCCTGAAAAAACTGCAACCGCATCATTACCTGGTATTACTCGACGAACGGGGCAAAGCCCTGAACTCCGTTCAATGGTCGCAGCAATTCCAGCAATGTATGAACCAGGGTGTAAAAACATTGGTAATCCTGATTGGCGGCGCATTTGGCGTTACTGATGCGATCCGCAAACAAGCCCGCCAGTGCTGGTCCTTATCGAACCTGGTATTCCCGCATCAGATGGTACGCCTGATCGTAGCCGAACAGATTTACCGGGCTTTCAGTATCCTGAATAATTCGCCGTATCATCATGAATGA
PROTEIN sequence
Length: 158
MNIEIWSLGKANEDFIASGLQYYFQKTKPWNPVELVILQLPKKSLTSDVARAKQQEEELILKKLQPHHYLVLLDERGKALNSVQWSQQFQQCMNQGVKTLVILIGGAFGVTDAIRKQARQCWSLSNLVFPHQMVRLIVAEQIYRAFSILNNSPYHHE*