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berkeley_reactor_200306_planktonic_scaffold_82142_21

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(23428..24300)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PES7_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 31.9
  • Coverage: 307.0
  • Bit_score: 147
  • Evalue 1.90e-32
Putative AraC family transcriptional regulator {ECO:0000313|EMBL:GAO41792.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.0
  • Coverage: 238.0
  • Bit_score: 152
  • Evalue 4.80e-34
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 31.9
  • Coverage: 307.0
  • Bit_score: 147
  • Evalue 5.30e-33

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Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 873
ATGGCGCCTGTTACAGAGATCATCCGTCCTAAAGCTGAATTTCTTCAGCGTTTTTTTGGTGAGGATGTGGTCGCCGTAGAAACCCATAAAGAAATTATCAGTACCGGCGTGCAATTGCACTATGCCGATGTAATGTTATCTCCCGTCCAGGATCAGCCGGAAGAAGTCGCTTTCCTGAATTTTTACCCGGTCGACGAAGGCAATTATTACCTGCAGCTCTCTTTCCTGCCCGAGAGCGGCGCTAAATCAGACGACGATAGTTACCGCGTGGTGCAGATGGTGTTTAACCCGGCATTCTTTTGCCAGTGGTCCAATGGCCTGATCTGCAAAAAACAGCCCTTCCGCTTCGATCGCAGCGCCGAACAGGCCTTCGCCCTGAATGCACAAAGCCGCGAAGCCTTGGAATTGTTGCTGAAGCCCGGCGTGGAAACCGACGATTTTATCCATGCTTTACGCCGCCAGGAGGCCGCCATCGCCCTGTTGCGGCATGCCCTCGAGGCCTTCCTTGTGCCCGACGAAGCCAATCGCCTGCCGGCCTGTAGCTTCCTGAGCCATTCCGGCGAACGCGATAAGGTGCTCGACGCCCAGCGTATTATCCTCGATCATCTCGACCGTCCGCTGACCATTAAGGAACTTTCCCGCGAAGTGGGTATGAACGAATGTTATCTGAAGAAAGGCTTTAAGGCGATGTTTGGAAAAACCATCCACGAATTCCAGCAATTCCAGCGTATCGAACGCTCCAAAGAATTGTTGTTACAGGGTAATCTCTCTATTAACGAAGTAGCCTTCAAAATGGGCTTTGGCAGCGCGTCTCACTTCAGTACCTCCTTTAAGAAAATAGCCGGAATGAAACCCTGCGAGTTGCTGGGCTAG
PROTEIN sequence
Length: 291
MAPVTEIIRPKAEFLQRFFGEDVVAVETHKEIISTGVQLHYADVMLSPVQDQPEEVAFLNFYPVDEGNYYLQLSFLPESGAKSDDDSYRVVQMVFNPAFFCQWSNGLICKKQPFRFDRSAEQAFALNAQSREALELLLKPGVETDDFIHALRRQEAAIALLRHALEAFLVPDEANRLPACSFLSHSGERDKVLDAQRIILDHLDRPLTIKELSREVGMNECYLKKGFKAMFGKTIHEFQQFQRIERSKELLLQGNLSINEVAFKMGFGSASHFSTSFKKIAGMKPCELLG*