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berkeley_reactor_200306_biofilm_scaffold_50288

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_biofilm_scaffold_50288_1
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(3..377)
DNA (375bp) protein (125aa)
Putative dehydrogenase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DEJ9_SINAD
dehydrogenase
Putative dehydrogenase {ECO:0000313|EMBL:AGA27086.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_50288_2
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

650..1087
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C4C7_9PLAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDL60360.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
berkeley_reactor_200306_biofilm_scaffold_50288_3
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1102..2301)
DNA (1200bp) protein (400aa)
Flp pilus assembly protein, ATPase CpaE n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DBT4_SINAD
Flp pilus assembly protein, ATPase CpaE
Flp pilus assembly protein, ATPase CpaE {ECO:0000313|EMBL:AGA26298.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_50288_4
unknown

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comp(2580..2888)
DNA (309bp) protein (103aa)

This feature has no annotations

berkeley_reactor_200306_biofilm_scaffold_50288_5
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

3534..4031
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C540A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB15511.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
berkeley_reactor_200306_biofilm_scaffold_50288_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4410..4622
DNA (213bp) protein (71aa)
antibiotic synthesis protein MbtH n=1 Tax=Amycolatopsis alba RepID=UPI000376FE28
antibiotic synthesis protein MbtH
Antibiotic synthesis protein MbtH {ECO:0000313|EMBL:AGP36519.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
berkeley_reactor_200306_biofilm_scaffold_50288_7
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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4666..5448
DNA (783bp) protein (261aa)
Phosphopantetheine--protein transferase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WEJ3_9CYAN
phosphopantetheine--protein transferase
Phosphopantetheine--protein transferase {ECO:0000313|EMBL:AFZ18179.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
berkeley_reactor_200306_biofilm_scaffold_50288_8
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(5474..7660)
DNA (2187bp) protein (729aa)
Macrolide export ATP-binding/permease protein MacB {ECO:0000256|HAMAP-Rule:MF_01720}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01720};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DP10_SINAD
antimicrobial peptide ABC transporter ATPase
berkeley_reactor_200306_biofilm_scaffold_50288_9
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(7675..8961)
DNA (1287bp) protein (429aa)
RND family efflux transporter, MFP subunit n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQD4_SINAD
RND family efflux transporter MFP subunit
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:AGA31113.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_50288_10
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(8958..10655)
DNA (1698bp) protein (566aa)
Cyclic peptide transporter n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DPC7_SINAD
cyclic peptide transporter
Cyclic peptide transporter {ECO:0000313|EMBL:AGA31112.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_50288_11
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10652..16663)
DNA (6012bp) protein (2004aa)
Amino acid adenylation enzyme/thioester reductase family protein n=2 Tax=Singulisphaera acidiphila RepID=L0DQE7_SINAD
amino acid adenylation enzyme/thioester reductase family protein
Amino acid adenylation enzyme/thioester reductase family protein {ECO:0000313|EMBL:AGA31110.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_50288_12
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(16696..20040)
DNA (3345bp) protein (1115aa)
Amino acid adenylation enzyme/thioester reductase family protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DP05_SINAD
Amino acid adenylation enzyme/thioester reductase family protein {ECO:0000313|EMBL:AGA31109.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
amino acid adenylation enzyme/thioester reductase family protein
berkeley_reactor_200306_biofilm_scaffold_50288_13
Xenococcus sp. PCC 7305, Xenococcus, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(20033..21853)
DNA (1821bp) protein (607aa)
amino acid adenylation protein (EC:5.1.1.13)
hypothetical protein n=1 Tax=cyanobacterium PCC 7702 RepID=UPI0003684EBB
Amino acid adenylation enzyme/thioester reductase family protein {ECO:0000313|EMBL:ELS00504.1}; TaxID=102125 species="Bacteria; Cyanobacteria; Pleurocapsales; Xenococcus.;" source="Xenococcus sp. PCC 7305.;"
Displaying 13 items

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