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berkeley_reactor_200306_biofilm_scaffold_53933

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_biofilm_scaffold_53933_1
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(2..577)
DNA (576bp) protein (192aa)
Thioredoxin domain-containing protein n=2 Tax=Singulisphaera acidiphila RepID=L0DPJ9_SINAD
thioredoxin domain-containing protein
Thioredoxin domain-containing protein {ECO:0000313|EMBL:AGA30745.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_53933_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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753..1745
DNA (993bp) protein (331aa)
Putative glycosyltransferase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DCP7_SINAD
glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:AGA26613.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_53933_3
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(1780..2475)
DNA (696bp) protein (232aa)
Transcriptional regulator, GntR family n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QYF1_PIRSD
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADB18110.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
berkeley_reactor_200306_biofilm_scaffold_53933_4
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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2697..3302
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F64343
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA31064.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_53933_5
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

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3341..4729
DNA (1389bp) protein (463aa)
oxidoreductase n=1 Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B609F0
oxidoreductase domain-containing protein
Tax=RBG_16_Caldithrix_48_16_curated
berkeley_reactor_200306_biofilm_scaffold_53933_6

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4788..5504
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DF46_SINAD
Marine sediment metagenome DNA, contig: S01H1_S32102 {ECO:0000313|EMBL:GAG33905.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
berkeley_reactor_200306_biofilm_scaffold_53933_7
unknown

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comp(5713..5958)
DNA (246bp) protein (82aa)

This feature has no annotations

berkeley_reactor_200306_biofilm_scaffold_53933_8
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6429..7469
DNA (1041bp) protein (347aa)
UPF0313 protein Sinac_2294 n=2 Tax=Singulisphaera acidiphila RepID=L0DBI9_SINAD
radical SAM protein YgiQ
UPF0313 protein Sinac_2294 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying 8 items

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