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berkeley_reactor_200306_biofilm_scaffold_27898

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_biofilm_scaffold_27898_1
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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comp(1..1023)
DNA (1023bp) protein (341aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ESX5_9BACT
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CCW34115.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
berkeley_reactor_200306_biofilm_scaffold_27898_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(1096..2451)
DNA (1356bp) protein (452aa)
signal peptide protein n=1 Tax=Schlesneria paludicola RepID=UPI00029B1C71
Uncharacterized protein {ECO:0000313|EMBL:EDY17818.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
membrane-bound dehydrogenase domain-containing protein
berkeley_reactor_200306_biofilm_scaffold_27898_3
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(2474..3883)
DNA (1410bp) protein (470aa)
Neutral/alkaline non-lysosomal ceramidase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DD44_SINAD
Neutral/alkaline non-lysosomal ceramidase
Neutral/alkaline non-lysosomal ceramidase {ECO:0000313|EMBL:AGA26758.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_27898_4
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(4066..4590)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DAF6_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA25641.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_27898_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(4590..5366)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D592_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA24604.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_27898_6
Paenibacillus sp. FSL R7-0331, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5527..7137)
DNA (1611bp) protein (537aa)
hypothetical protein n=1 Tax=Laceyella sacchari RepID=UPI0003B74D3B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ53968.1}; TaxID=1536773 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-0331.;"
berkeley_reactor_200306_biofilm_scaffold_27898_7
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

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7357..8157
DNA (801bp) protein (267aa)
Polysaccharide deacetylase id=2690272 bin=GWC2_Ignavibacteria_56_12 species=Echinicola vietnamensis genus=Echinicola taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
cellulase
Tax=BJP_IG2102_BRC1_58_13
berkeley_reactor_200306_biofilm_scaffold_27898_8
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(8214..9350)
DNA (1137bp) protein (379aa)
Multidrug resistance efflux pump n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DCQ8_SINAD
multidrug resistance efflux pump
Multidrug resistance efflux pump {ECO:0000313|EMBL:AGA26421.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_27898_9
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(9347..10063)
DNA (717bp) protein (239aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DC40_SINAD
antimicrobial peptide ABC transporter ATPase
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:AGA26420.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_27898_10
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10081..11205)
DNA (1125bp) protein (375aa)
ABC-type antimicrobial peptide transport system, permease component n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DAM5_SINAD
antimicrobial peptide ABC transporter permease
ABC-type antimicrobial peptide transport system, permease component {ECO:0000313|EMBL:AGA26419.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_27898_11
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

11477..18157
DNA (6681bp) protein (2227aa)
Polyketide synthase family protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DAL9_SINAD
polyketide synthase family protein
Polyketide synthase family protein {ECO:0000313|EMBL:AGA26414.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying 11 items

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