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berkeley_reactor_200306_biofilm_scaffold_75464

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_biofilm_scaffold_75464_1
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(71..1303)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFN3_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27628.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_75464_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1341..4364)
DNA (3024bp) protein (1008aa)
TPR repeat-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJH7_SINAD
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:AGA29000.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_75464_3
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4389..5456)
DNA (1068bp) protein (356aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DE18_SINAD
prepilin-type N-terminal cleavage/methylation domain-containing protein
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:AGA27629.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_75464_4
unknown

Not on your lists

comp(5609..5845)
DNA (237bp) protein (79aa)
hypothetical protein
berkeley_reactor_200306_biofilm_scaffold_75464_5
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

7037..10096
DNA (3060bp) protein (1020aa)
MdsD protein, putative n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DTW0_9BACT
periplasmic protease
Tax=RBG_16_Planctomycetes_55_9_curated
berkeley_reactor_200306_biofilm_scaffold_75464_6
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

10123..11172
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DKR6_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA29969.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_75464_7
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11191..11991)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DPR3_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA30810.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_75464_8
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

13377..14552
DNA (1176bp) protein (392aa)
elongation factor Tu n=1 Tax=Schlesneria paludicola RepID=UPI00029A4120
translation elongation factor 1A (EF-1A/EF-Tu)
Tax=RBG_13_Planctomycetes_63_9_curated
berkeley_reactor_200306_biofilm_scaffold_75464_9
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

14745..15329
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C117_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EDL61740.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
berkeley_reactor_200306_biofilm_scaffold_75464_10
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15458..17086
DNA (1629bp) protein (543aa)
Putative limonene hydroxylase CD6-2 n=1 Tax=Enterobacter cloacae S611 RepID=V5AP20_ENTCL
Uncharacterized protein {ECO:0000313|EMBL:GAL85554.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
limonene hydroxylase
berkeley_reactor_200306_biofilm_scaffold_75464_11
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

17159..17773
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IJ38_PHYMF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM05276.1}; TaxID=1142394 species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
berkeley_reactor_200306_biofilm_scaffold_75464_12
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(18255..18575)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DI68_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA28550.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_75464_13
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(18889..19083)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DI68_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA28550.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_75464_14
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(19566..20252)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029B0D0A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA31358.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_75464_15
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(20888..21928)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A3906
hypothetical protein
Tax=RBG_13_Planctomycetes_62_9_curated
berkeley_reactor_200306_biofilm_scaffold_75464_16
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

22468..23208
DNA (741bp) protein (247aa)
Uncharacterized protein n=2 Tax=Singulisphaera acidiphila RepID=L0DER1_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27747.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_75464_17
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

23208..24215
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DG05_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27748.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_75464_18
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(24455..26083)
DNA (1629bp) protein (543aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DNH2_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA30817.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_75464_19
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

26236..27423
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DPQ0_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA30818.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_75464_20
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(27446..27829)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DD11_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27132.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_75464_21
RLO_PLX_64_10, Bacteria

Not on your lists

comp(27858..28979)
DNA (1122bp) protein (374aa)
Putative beta-lactamase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C5X7_9PLAN
beta-lactamase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
berkeley_reactor_200306_biofilm_scaffold_75464_22
unknown

Not on your lists

29562..29741
DNA (180bp) protein (60aa)

This feature has no annotations

berkeley_reactor_200306_biofilm_scaffold_75464_23
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(29760..30071)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5A15
transposase family protein
Transposase family protein {ECO:0000313|EMBL:AGA26189.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying 23 items

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