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cn_combo_scaffold_1425

Alias: PHE14_2

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1425_1
Sphingomonas sp. NS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..556)
DNA (555bp) protein (185aa)
UspA domain-containing protein n=1 Tax=Sphingobium indicum B90A RepID=I5BGT0_9SPHN
UspA {ECO:0000313|EMBL:AJW29293.1}; TaxID=908605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. NS2.;"
universal stress protein UspA
cn_combo_scaffold_1425_2
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

701..1045
DNA (345bp) protein (115aa)
Probable uroporphyrin-III c-methyltransferase {ECO:0000313|EMBL:CDP49916.1}; EC=2.1.1.107 {ECO:0000313|EMBL:CDP49916.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobia
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S2Z8_9SPHN
hypothetical protein
cn_combo_scaffold_1425_3
alpha proteobacterium JLT2015, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1052..1333)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium JLT2015 RepID=M2U1B0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EMD81618.1}; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
tellurite resistance-like domain-containing protein
cn_combo_scaffold_1425_4
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1336..1794)
DNA (459bp) protein (153aa)
Truncated hemoglobin-like protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHN0_PHEZH
hypothetical protein; K06886 hemoglobin Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_1425_5
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1888..3549
DNA (1662bp) protein (554aa)
Cytochrome c oxidase, subunit I n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RA81_PHEZH
coxA; cytochrome c oxidase subunit I rbh
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:ACG79585.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Pheny
cn_combo_scaffold_1425_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3618..4064
DNA (447bp) protein (149aa)
Transcriptional regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL72_9GAMM
Transcriptional regulator {ECO:0000313|EMBL:EIL87963.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
transcriptional regulator
cn_combo_scaffold_1425_7
unknown

Not on your lists

4186..4467
DNA (282bp) protein (94aa)

This feature has no annotations

cn_combo_scaffold_1425_8
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4741..5514)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI00037FCF57
Prevent-host-death family protein {ECO:0000313|EMBL:EJL37827.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Cauloba
cn_combo_scaffold_1425_9
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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5902..7407
DNA (1506bp) protein (502aa)
sulfotransferase id=12493064 bin=THIO_HI species=Methylomonas sp. MK1 genus=Methylomonas taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
sulfotransferase
Sulfotransferase {ECO:0000313|EMBL:AEG01091.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (
cn_combo_scaffold_1425_10
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7702..8502
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PAW9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGF79483.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;
hypothetical protein
cn_combo_scaffold_1425_trna_1
unknown

Not on your lists

comp(8652..8722)
DNA (71bp)
transferRNA
cn_combo_scaffold_1425_11
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8887..9459
DNA (573bp) protein (191aa)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VJ10_CAUST
protein-L-isoaspartate O-methyltransferase
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:ADG10098.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source=
cn_combo_scaffold_1425_12
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9668..11128
DNA (1461bp) protein (487aa)
Type I secretion outer membrane protein, TolC n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R986_PHEZH
type I secretion outer membrane protein, TolC; K12340 outer membrane channel protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
type I secretion outer membrane protein, TolC
cn_combo_scaffold_1425_13
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11293..11799
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R987_PHEZH
hypothetical protein; K09991 hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
hypothetical protein
cn_combo_scaffold_1425_14
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12005..14668
DNA (2664bp) protein (888aa)
valS; valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
Valine--tRNA ligase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R988_PHEZH
valS; valyl-tRNA synthetase
cn_combo_scaffold_1425_15
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14813..16570
DNA (1758bp) protein (586aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R989_PHEZH
fadD; long-chain-fatty-acid--CoA ligase
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:ACG77759.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phe
cn_combo_scaffold_1425_16
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16573..17304
DNA (732bp) protein (244aa)
Hemolysin A n=1 Tax=Caulobacter crescentus OR37 RepID=R0CZ49_CAUCE
Hemolysin A {ECO:0000313|EMBL:ENZ81550.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;
hemolysin A
cn_combo_scaffold_1425_17
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17380..17955)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2ZR97_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL21344.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source
hypothetical protein
cn_combo_scaffold_1425_18
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18001..18444)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QGI0_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY26775.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas d
hypothetical protein
cn_combo_scaffold_1425_19
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18617..19903
DNA (1287bp) protein (429aa)
RNA methyltransferase, TrmA family; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
RNA methyltransferase, TrmA family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R992_PHEZH
RNA methyltransferase, TrmA family
cn_combo_scaffold_1425_20
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19916..20581)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2HFY6_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL34518.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source
hypothetical protein
cn_combo_scaffold_1425_21
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20660..21724)
DNA (1065bp) protein (355aa)
Nitrogenase cofactor biosynthesis protein NifB n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R996_PHEZH
nitrogenase cofactor biosynthesis protein NifB
Nitrogenase cofactor biosynthesis protein NifB {ECO:0000313|EMBL:ACG77766.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;
cn_combo_scaffold_1425_22
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21825..22277
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R997_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG77767.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
cn_combo_scaffold_1425_23
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22323..23924)
DNA (1602bp) protein (534aa)
Soluble lytic murein transglycosylase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R998_PHEZH
soluble lytic murein transglycosylase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
soluble lytic murein transglycosylase
cn_combo_scaffold_1425_24
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24012..24830)
DNA (819bp) protein (273aa)
Uracil-DNA glycosylase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R999_PHEZH
uracil-DNA glycosylase
Uracil-DNA glycosylase {ECO:0000313|EMBL:ACG77769.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacteri
cn_combo_scaffold_1425_25
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24974..26656
DNA (1683bp) protein (561aa)
electron-transferring-flavoprotein dehydrogenase (EC:1.5.5.1); K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
PREDICTED: electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C15713
electrotransfer ubiquinone oxidoreductase
cn_combo_scaffold_1425_26
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27024..28730
DNA (1707bp) protein (569aa)
TPR domain protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9A2_PHEZH
TPR domain-containing protein
TPR domain protein {ECO:0000313|EMBL:ACG77772.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium z
cn_combo_scaffold_1425_27
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28738..29625
DNA (888bp) protein (296aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9A3_PHEZH
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
cn_combo_scaffold_1425_28
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29702..31015)
DNA (1314bp) protein (438aa)
PREDICTED: ammonium transporter 1-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1B0B7
amtB; ammonium transporter; K03320 ammonium transporter, Amt family Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
amtB; ammonium transporter
cn_combo_scaffold_1425_29
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31054..31392)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II-2 n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9A5_PHEZH
glnK; nitrogen regulatory protein P-II-2
Nitrogen regulatory protein P-II-2 {ECO:0000313|EMBL:ACG77775.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Ph
Displaying items 1-30 of 34 in total

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