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cn_combo_scaffold_2043

Alias: PHE14_7

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2043_1
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..254)
DNA (252bp) protein (84aa)
Phosphate starvation-inducible protein PhoH, predicted ATPase n=1 Tax=Caulobacter crescentus OR37 RepID=R0D192_CAUCE
Phosphate starvation-inducible protein PhoH, predicted ATPase {ECO:0000313|EMBL:ENZ82436.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Ca
PhoH family protein
cn_combo_scaffold_2043_2
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(251..1591)
DNA (1341bp) protein (447aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000255|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000255|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=MIAB_PHEZH
(dimethylallyl)adenosine tRNA methylthiotransferase
cn_combo_scaffold_2043_3
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1652..2059)
DNA (408bp) protein (136aa)
Fe2+/Zn2+ uptake regulation protein n=1 Tax=Caulobacter sp. AP07 RepID=J2QAZ6_9CAUL
ferric uptake regulator family protein; K03711 Fur family transcriptional regulator, ferric uptake regulator Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
ferric uptake regulator family protein
cn_combo_scaffold_2043_4
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2106..2558)
DNA (453bp) protein (151aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Caulobacter sp. AP07 RepID=J3ASY7_9CAUL
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EJL37251.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" sourc
ribosomal-protein-alanine acetyltransferase
cn_combo_scaffold_2043_5
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2555..3214)
DNA (660bp) protein (220aa)
Metal-dependent protease (With possible chaperone activity) n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC73_PHEZH
metal-dependent protease
metal-dependent protease Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
cn_combo_scaffold_2043_6
unknown

Not on your lists

comp(3190..3723)
DNA (534bp) protein (178aa)

This feature has no annotations

cn_combo_scaffold_2043_7
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3733..4305)
DNA (573bp) protein (191aa)
Thioredoxin-like protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC74_PHEZH
thioredoxin-like protein rbh
Thioredoxin-like protein {ECO:0000313|EMBL:ACG79867.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacte
cn_combo_scaffold_2043_8
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4513..4986)
DNA (474bp) protein (158aa)
Universal stress protein UspA n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC75_PHEZH
universal stress protein UspA Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
universal stress protein UspA
cn_combo_scaffold_2043_9
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5044..6078)
DNA (1035bp) protein (345aa)
trpS; tryptophanyl-tRNA synthetase; K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
Tryptophan--tRNA ligase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC76_PHEZH
trpS; tryptophanyl-tRNA synthetase
cn_combo_scaffold_2043_10
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6225..7862)
DNA (1638bp) protein (546aa)
Virulence factor MviN-like protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC77_PHEZH
virulence factor MviN-like protein
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phe
cn_combo_scaffold_2043_11
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8375..9424
DNA (1050bp) protein (350aa)
Phosphate binding protein n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HHF9_RHIRD
pstS; phosphate ABC transporter substrate-binding protein; K02040 phosphate transport system substrate-binding protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
pstS; phosphate ABC transporter substrate-binding protein
cn_combo_scaffold_2043_12
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9497..10432
DNA (936bp) protein (312aa)
PstC n=1 Tax=Sinorhizobium sp. M14 RepID=E9KN58_9RHIZ
phosphate ABC transporter permease; K02037 phosphate transport system permease protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
phosphate ABC transporter permease
cn_combo_scaffold_2043_13
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10432..11355
DNA (924bp) protein (308aa)
PstA n=1 Tax=Sinorhizobium sp. M14 RepID=E9KN57_9RHIZ
phosphate ABC transporter permease; K02038 phosphate transport system permease protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
phosphate ABC transporter permease
cn_combo_scaffold_2043_14
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11418..12203
DNA (786bp) protein (262aa)
phosphate ABC transporter ATPase; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Phosphate ABC transporter, ATPase subunit n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMD4_XANP2
phosphate ABC transporter ATPase
cn_combo_scaffold_2043_15
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12213..12605
DNA (393bp) protein (131aa)
Regulatory protein ArsR n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I460_RHOVT
regulatory protein ArsR
Regulatory protein ArsR {ECO:0000313|EMBL:ADP72709.1}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium van
cn_combo_scaffold_2043_16
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13079..13702
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI0003732947
Ribbon-helix-helix protein, CopG family {ECO:0000313|EMBL:EKY29701.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source=
hypothetical protein
cn_combo_scaffold_2043_17
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13766..14083)
DNA (318bp) protein (106aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
cn_combo_scaffold_2043_18
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14561..15091
DNA (531bp) protein (177aa)
Site-specific recombinase, resolvase family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFJ8_PHEZH
site-specific recombinase, resolvase
Site-specific recombinase, resolvase family {ECO:0000313|EMBL:ACG77079.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" s
cn_combo_scaffold_2043_19
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15095..15877
DNA (783bp) protein (261aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=103519
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QRJ2_BREDI
peptidase A24A domain-containing protein
cn_combo_scaffold_2043_20
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15874..16356)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RW55_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH47801.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
cn_combo_scaffold_2043_21
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16343..17080)
DNA (738bp) protein (246aa)
Type II secretion system protein N n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFJ6_PHEZH
type II secretion system protein N
Type II secretion system protein N {ECO:0000313|EMBL:ACG77077.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Ph
cn_combo_scaffold_2043_22
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17077..17550)
DNA (474bp) protein (158aa)
type II secretory pathway component PulM n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037C1884
Type II secretion system protein M {ECO:0000256|PIRNR:PIRNR006291}; Short=T2SS protein M {ECO:0000256|PIRNR:PIRNR006291};; General secretion pathway protein M {ECO:0000256|PIRNR:PIRNR006291}; TaxID=13
pulM; type II secretory pathway component PulM
cn_combo_scaffold_2043_23
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17547..18662)
DNA (1116bp) protein (372aa)
Type II secretion system protein L n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFJ5_PHEZH
xcsL; type II secretion system protein L
Type II secretion system protein L {ECO:0000313|EMBL:ACG77076.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Ph
cn_combo_scaffold_2043_24
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18659..19627)
DNA (969bp) protein (323aa)
Type II secretion system protein K id=2616560 bin=GWF1_Xanthomonadales_69_6 species=Xanthomonas vesicatoria genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
type II secretion system protein K; K02460 general secretion pathway protein K Tax=GWF1_Xanthomonadales_69_6_curated
xcsK; type II secretion system protein K
cn_combo_scaffold_2043_25
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19624..20205)
DNA (582bp) protein (194aa)
Type II secretion pathway protein J n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8GXR9_CAUCN
xcsJ; type II secretion system protein J; K02459 general secretion pathway protein J Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
type II secretion pathway protein J
cn_combo_scaffold_2043_26
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20202..20567)
DNA (366bp) protein (122aa)
Type II secretion system protein I n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFJ2_PHEZH
xcsI; type II secretion system protein I
Type II secretion system protein I {ECO:0000313|EMBL:ACG77073.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Ph
cn_combo_scaffold_2043_27
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20551..21030)
DNA (480bp) protein (160aa)
Type II secretion system protein H n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFJ1_PHEZH
xcsH; type II secretion system protein H
Type II secretion system protein H {ECO:0000313|EMBL:ACG77072.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Ph
cn_combo_scaffold_2043_28
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21005..21451)
DNA (447bp) protein (149aa)
Type II secretion system protein G n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFJ0_PHEZH
xcsG; type II secretion system protein G
Type II secretion system protein G {ECO:0000313|EMBL:ACG77071.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Ph
cn_combo_scaffold_2043_29
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21463..22677)
DNA (1215bp) protein (405aa)
General secretion pathway protein F n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2YUD2_9CAUL
General secretion pathway protein F {ECO:0000313|EMBL:GAD59096.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Bre
xcsF; type II secretion system protein F
cn_combo_scaffold_2043_30
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22664..24148)
DNA (1485bp) protein (495aa)
Type II secretion system protein E n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFI8_PHEZH
xcsE; type II secretion system protein E; K02454 general secretion pathway protein E Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
xcsE; type II secretion system protein E
Displaying items 1-30 of 37 in total

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