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cn_combo_scaffold_2165

Alias: PHE14_9

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2165_1
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112..318)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBK1_PHEZH
hypothetical protein
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
cn_combo_scaffold_2165_2
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

467..871
DNA (405bp) protein (135aa)
MAPEG family n=1 Tax=Caulobacter sp. AP07 RepID=J2GRA6_9CAUL
membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG) Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
eicosanoid and glutathione metabolism membrane protein
cn_combo_scaffold_2165_3
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(868..1638)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHP0_PHEZH
hypothetical protein; K07090 Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
hypothetical protein
cn_combo_scaffold_2165_4
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1763..2413
DNA (651bp) protein (217aa)
Putative threonine efflux protein n=1 Tax=Caulobacter sp. AP07 RepID=J3AL95_9CAUL
amino acid efflux permease
Putative threonine efflux protein {ECO:0000313|EMBL:EJL32884.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter
cn_combo_scaffold_2165_5
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2497..3075
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBJ9_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG76459.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
cn_combo_scaffold_2165_6
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3086..5380)
DNA (2295bp) protein (765aa)
Uncharacterized signaling protein CC_0091 n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=Y091_CAUCR
MHYT/PAS-family GGDEF/EAL protein
Uncharacterized signaling protein CC_0091; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain
cn_combo_scaffold_2165_7
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5580..5849)
DNA (270bp) protein (90aa)
hypothetical protein
Uncharacterized protein; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
cn_combo_scaffold_2165_8
unknown

Not on your lists

comp(5842..6171)
DNA (330bp) protein (110aa)

This feature has no annotations

cn_combo_scaffold_2165_9
unknown

Not on your lists

6319..6573
DNA (255bp) protein (85aa)

This feature has no annotations

cn_combo_scaffold_2165_trna_1
unknown

Not on your lists

comp(6513..6584)
DNA (72bp)
transferRNA
cn_combo_scaffold_2165_10
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6670..7410)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBH1_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
hypothetical protein
cn_combo_scaffold_2165_11
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7505..8017
DNA (513bp) protein (171aa)
YbaK/prolyl-tRNA synthetase associated region n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T1V0_CAUSK
YbaK/prolyl-tRNA synthetase associated region Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
YbaK/prolyl-tRNA synthetase associated domain-containing protein
cn_combo_scaffold_2165_12
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8114..9004
DNA (891bp) protein (297aa)
Thioredoxin n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBH3_PHEZH
thioredoxin; K05838 putative thioredoxin Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
thioredoxin
cn_combo_scaffold_2165_13
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9019..9681
DNA (663bp) protein (221aa)
ATP-dependent protease La domain protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBH4_PHEZH
ATP-dependent protease La domain-containing protein
ATP-dependent protease La domain protein {ECO:0000313|EMBL:ACG76434.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" sour
cn_combo_scaffold_2165_14
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9691..9894
DNA (204bp) protein (68aa)
UPF0434 protein OR37_03095 n=1 Tax=Caulobacter crescentus OR37 RepID=R0EFY7_CAUCE
lpxK; tetraacyldisaccharide-1-P 4-kinase; K09791 hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
hypothetical protein
cn_combo_scaffold_2165_15
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9891..10439)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC40_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
hypothetical protein
cn_combo_scaffold_2165_16
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10530..11486
DNA (957bp) protein (319aa)
ISSpo8, transposase n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2YY52_9CAUL
ISSpo8, transposase {ECO:0000313|EMBL:GAD60441.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyss
transposase
cn_combo_scaffold_2165_17
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11722..12612)
DNA (891bp) protein (297aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JPH4_HYPDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ21865.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium den
cn_combo_scaffold_2165_18
unknown

Not on your lists

comp(12775..12936)
DNA (162bp) protein (54aa)

This feature has no annotations

cn_combo_scaffold_2165_19
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13270..14478
DNA (1209bp) protein (403aa)
dfp; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5]
DNA/pantothenate metabolism flavoprotein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC39_PHEZH
dfp; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase
cn_combo_scaffold_2165_20
unknown

Not on your lists

comp(14557..15024)
DNA (468bp) protein (156aa)

This feature has no annotations

cn_combo_scaffold_2165_21
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15034..15408)
DNA (375bp) protein (125aa)
Cytochrome c n=1 Tax=Caulobacter crescentus (strain NA1000 / CB15N) RepID=B8GVJ9_CAUCN
cytochrome c
Cytochrome c family protein {ECO:0000313|EMBL:AAK23610.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter cr
cn_combo_scaffold_2165_22
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15553..17094
DNA (1542bp) protein (514aa)
Glycolate oxidase, subunit GlcD n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z2V3_AZOL4
Glycolate oxidase subunit GlcD {ECO:0000313|EMBL:KGM35563.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinu
glcD; glycolate oxidase subunit GlcD
cn_combo_scaffold_2165_23
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17097..18314
DNA (1218bp) protein (406aa)
Glycolate oxidase, subunit glcE n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IU02_RHOCS
glcE; glycolate oxidase, subunit glcE
Glycolate oxidase, subunit glcE {ECO:0000313|EMBL:ACI99538.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodo
cn_combo_scaffold_2165_24
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18314..19606
DNA (1293bp) protein (431aa)
Glycolate oxidase iron-sulfur subunit n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NRV8_AZOS1
glcF; glycolate oxidase, iron-sulfur subunit GlcF
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculu
cn_combo_scaffold_2165_25
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19603..20055)
DNA (453bp) protein (151aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Caulobacter crescentus OR37 RepID=R0D2H2_CAUCE
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
cn_combo_scaffold_2165_26
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20462..21889)
DNA (1428bp) protein (476aa)
amidase; K01426 amidase [EC:3.5.1.4] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Amidase n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IJS1_BEII9
amidase
cn_combo_scaffold_2165_27
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21889..22635)
DNA (747bp) protein (249aa)
dihydrodipicolinate reductase (EC:1.3.1.26); K00215 dihydrodipicolinate reductase [EC:1.3.1.26] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=DAPB_CAUCR
dihydrodipicolinate reductase
cn_combo_scaffold_2165_28
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22892..25180
DNA (2289bp) protein (763aa)
malic enzyme; K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
NADP-dependent malic enzyme n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC34_PHEZH
malic enzyme
Displaying 29 items

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