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cn_combo_scaffold_2409

Alias: PHE14_13

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2409_1
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112..852
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHH7_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
putative terminase small subunit (modular protein)
cn_combo_scaffold_2409_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

964..1347
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QSC7_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY30615.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas d
cn_combo_scaffold_2409_3
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1340..1894)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IKJ6_BORPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX15244.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
cn_combo_scaffold_2409_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2025..3902
DNA (1878bp) protein (626aa)
peptidase M1 n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B69BA9
aminopeptidase
Aminopeptidase {ECO:0000313|EMBL:AJP72477.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8
cn_combo_scaffold_2409_5
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3927..4571)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2ZLV7_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL20276.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. A
hypothetical protein
cn_combo_scaffold_2409_6
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4646..5116)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00037F85D4
AsnC family transcriptional regulator; K05800 Lrp/AsnC family transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
AsnC-family transcriptional regulator
cn_combo_scaffold_2409_7
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5258..6331
DNA (1074bp) protein (358aa)
4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27); K00457 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27)
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Caulobacter crescentus OR37 RepID=R0CZM5_CAUCE
cn_combo_scaffold_2409_8
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6365..7657
DNA (1293bp) protein (431aa)
homogentisate 1,2-dioxygenase (EC:1.13.11.5); K00451 homogentisate 1,2-dioxygenase [EC:1.13.11.5] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
hmgA; homogentisate 1,2-dioxygenase (EC:1.13.11.5)
Homogentisate 1,2-dioxygenase n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TUM9_9DELT
cn_combo_scaffold_2409_9
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7782..9056
DNA (1275bp) protein (425aa)
O-acetylhomoserine aminocarboxypropyltransferase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase {ECO:0000313|EMBL:AGH49917.1}; EC=2.5.1.49 {ECO:0000313|EMBL:AGH49917.1};; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingo
O-acetylhomoserine aminocarboxypropyltransferase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SH56_9SPHN
cn_combo_scaffold_2409_10
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9082..9528)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2HN31_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL37203.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. A
3-demethylubiquinone-9 3-methyltransferase
cn_combo_scaffold_2409_11
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9617..10519)
DNA (903bp) protein (301aa)
Siderophore-interacting protein n=1 Tax=Rhizobium sp. CF080 RepID=J3C6Y8_9RHIZ
FAD-binding 9 siderophore-interacting domain protein {ECO:0000313|EMBL:EUB99357.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacte
siderophore-interacting protein rbh
cn_combo_scaffold_2409_12
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10533..11681)
DNA (1149bp) protein (383aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1144304 species
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Caulobacter sp. AP07 RepID=J2GHV4_9CAUL
cn_combo_scaffold_2409_13
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11681..12715)
DNA (1035bp) protein (345aa)
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate transaminase (Isomerizing) {ECO:0000313|EMBL:ABZ69427.1}; EC=2.6.1.16 {ECO:0000313|EMBL:ABZ69427.1};; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteri
Glutamine--fructose-6-phosphate transaminase (Isomerizing) n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T4C7_CAUSK
cn_combo_scaffold_2409_14
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12738..13475)
DNA (738bp) protein (246aa)
Transcriptional regulator, GntR family n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8GZN7_CAUCN
GntR-family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AAK22432.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Cau
cn_combo_scaffold_2409_15
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13720..16380
DNA (2661bp) protein (887aa)
TonB-dependent receptor n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VNT8_CAUST
TonB-dependent receptor rbh
TonB-dependent receptor {ECO:0000313|EMBL:ADG12161.1}; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source=
cn_combo_scaffold_2409_16
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16601..18889
DNA (2289bp) protein (763aa)
N-acetyl-beta-hexosaminidase n=1 Tax=Caulobacter crescentus OR37 RepID=R0EIP7_CAUCE
N-acetyl-beta-hexosaminidase {ECO:0000313|EMBL:ENZ81047.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter
beta-N-acetylhexosaminidase
cn_combo_scaffold_2409_17
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18879..21383
DNA (2505bp) protein (835aa)
Phosphotransferase system HPr (HPr) family protein n=1 Tax=Caulobacter sp. AP07 RepID=J2HBB3_9CAUL
Phosphotransferase system HPr (HPr) family protein {ECO:0000313|EMBL:EJL32823.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;
phosphoenolpyruvate-protein phosphotransferase rbh
cn_combo_scaffold_2409_18
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21383..22843
DNA (1461bp) protein (487aa)
PTS system, N-acetylglucosamine-specific IIBC subunit n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VM57_CAUST
PTS system subunit IIBC
PTS system, N-acetylglucosamine-specific IIBC subunit {ECO:0000313|EMBL:ADG11580.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter
Displaying 18 items

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