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cn_combo_scaffold_2724

Alias: PHE14_19

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2724_1
unknown

Not on your lists

comp(1..72)
DNA (72bp) protein (24aa)

This feature has no annotations

cn_combo_scaffold_2724_2
Acetobacter tropicalis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(69..308)
DNA (240bp) protein (80aa)
CopG/Arc/MetJ family transcriptional regulator n=1 Tax=Acetobacter tropicalis NBRC 101654 RepID=F7VJE5_9PROT
CopG/Arc/MetJ family transcriptional regulator {ECO:0000313|EMBL:GAA10490.1}; TaxID=749388 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" so
hypothetical protein
cn_combo_scaffold_2724_3
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

516..3278
DNA (2763bp) protein (921aa)
Protein translocase subunit SecA n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RG48_PHEZH
secA; preprotein translocase subunit SecA
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteracea
cn_combo_scaffold_2724_4
Trichodesmium erythraeum, Trichodesmium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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3283..4083
DNA (801bp) protein (267aa)
Methyltransferase type 11 n=1 Tax=Trichodesmium erythraeum (strain IMS101) RepID=Q10ZH3_TRIEI
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ABG52351.1}; TaxID=203124 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Trichodesmium.;" source="Trichodesmium erythraeum (strai
cn_combo_scaffold_2724_5
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4261..4725)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HF47_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB11642.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium qui
hypothetical protein
cn_combo_scaffold_2724_6
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4729..5526)
DNA (798bp) protein (266aa)
NAD+ synthetase n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0H5M1_9SPHN
NAD+ synthetase {ECO:0000313|EMBL:EZP71738.1}; Flags: Precursor;; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphin
nickel transport complex protein nikM subunit transmembrane
cn_combo_scaffold_2724_7
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5690..6802
DNA (1113bp) protein (371aa)
TonB-dependent heme/hemoglobin receptor family protein n=1 Tax=Sphingobium sp. AP49 RepID=J2KYQ0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE53371.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
TonB-dependent heme/hemoglobin receptor family protein
cn_combo_scaffold_2724_8
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6875..7744
DNA (870bp) protein (290aa)
TonB-dependent heme/hemoglobin receptor family protein n=1 Tax=Sphingobium sp. AP49 RepID=J2KYQ0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE53371.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
TonB-dependent heme/hemoglobin receptor family protein
cn_combo_scaffold_2724_9
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7747..8451
DNA (705bp) protein (235aa)
TonB family protein n=1 Tax=Sphingobium sp. AP49 RepID=J2WC90_9SPHN
TonB family protein {ECO:0000313|EMBL:EJK80240.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="
TonB family protein
cn_combo_scaffold_2724_10
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8590..10263)
DNA (1674bp) protein (558aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000
2-isopropylmalate synthase n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y2Q2_9PROT
leuA; 2-isopropylmalate synthase
cn_combo_scaffold_2724_11
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10430..10804)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus (strain NA1000 / CB15N) RepID=B8H3I4_CAUCN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENZ80584.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter cresc
cn_combo_scaffold_2724_12
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10801..11781)
DNA (981bp) protein (327aa)
Branched-chain amino acid transport system ATP-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IBZ7_9BRAD
Branched-chain amino acid transport system ATP-binding protein {ECO:0000313|EMBL:ERF79884.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Brad
zinc-binding dehydrogenase family oxidoreductase
cn_combo_scaffold_2724_13
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12041..13429)
DNA (1389bp) protein (463aa)
Retinal pigment epithelial membrane protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RG44_PHEZH
retinal pigment epithelial membrane protein
Retinal pigment epithelial membrane protein {ECO:0000313|EMBL:ACG77168.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" s
cn_combo_scaffold_2724_14
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13523..14125
DNA (603bp) protein (201aa)
Transcriptional regulator, TetR family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RG43_PHEZH
transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACG77167.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source
cn_combo_scaffold_2724_15
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14208..15350
DNA (1143bp) protein (381aa)
Epoxide hydrolase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RG42_PHEZH
epoxide hydrolase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
epoxide hydrolase
cn_combo_scaffold_2724_16
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15367..17703)
DNA (2337bp) protein (779aa)
Sensor histidine kinase/response regulator n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R8F0_PHEZH
sensor histidine kinase/response regulator Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
sensor histidine kinase/response regulator
cn_combo_scaffold_2724_17
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17777..18784
DNA (1008bp) protein (336aa)
Threonine aldolase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RG41_PHEZH
threonine aldolase
Threonine aldolase {ECO:0000313|EMBL:ACG77165.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium z
cn_combo_scaffold_2724_18
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18858..19820)
DNA (963bp) protein (321aa)
acetyl-CoA carboxylase carboxyltransferase subunit alpha; K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=ACCA_PHEZH
acetyl-CoA carboxylase carboxyltransferase subunit alpha
cn_combo_scaffold_2724_19
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20056..20568
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RG37_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG77161.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
Displaying 19 items

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