ggKbase home page

cn_combo_scaffold_3156

Alias: PHE14_24

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3156_1
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..2724)
DNA (2724bp) protein (908aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=450851 species="Bacteria; Pr
Transcription-repair-coupling factor n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAX9_PHEZH
transcription-repair coupling factor
cn_combo_scaffold_3156_2
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2714..3004)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J3AJZ9_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL32344.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. A
hypothetical protein
cn_combo_scaffold_3156_3
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3049..3651)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2HJF5_9CAUL
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
hypothetical protein
cn_combo_scaffold_3156_4
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3731..5806
DNA (2076bp) protein (692aa)
recG; ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
ATP-dependent DNA helicase RecG n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAY1_PHEZH
recG; ATP-dependent DNA helicase RecG
cn_combo_scaffold_3156_5
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5790..6911)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAY3_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG78034.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
cn_combo_scaffold_3156_6
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6919..7917)
DNA (999bp) protein (333aa)
rfaD; ADP-L-glycero-D-manno-heptose-6-epimerase; K03274 ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
ADP-L-glycero-D-mannoheptose-6-epimerase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAY4_PHEZH
rfaD; ADP-L-glycero-D-manno-heptose-6-epimerase
cn_combo_scaffold_3156_7
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7914..9368)
DNA (1455bp) protein (485aa)
Bifunctional protein HldE n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAY5_PHEZH
rfaE; rfaE protein
Bifunctional protein HldE {ECO:0000256|HAMAP-Rule:MF_01603, ECO:0000256|SAAS:SAAS00015122}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phen
cn_combo_scaffold_3156_8
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9391..10236)
DNA (846bp) protein (282aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|SAAS:SAAS00078538};; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacte
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T3H2_CAUSK
2-dehydro-3-deoxyphosphooctonate aldolase
cn_combo_scaffold_3156_9
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10424..11680
DNA (1257bp) protein (419aa)
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAY7_PHEZH
cfa; cyclopropane-fatty-acyl-phospholipid synthase
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:ACG78038.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;"
cn_combo_scaffold_3156_10
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11781..12779
DNA (999bp) protein (333aa)
cysB; cysteine synthase A; K01738 cysteine synthase A [EC:2.5.1.47] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
Cysteine synthase n=1 Tax=Caulobacter sp. AP07 RepID=J2G5Y1_9CAUL
cysteine synthase A
cn_combo_scaffold_3156_11
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12782..13618
DNA (837bp) protein (279aa)
3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2)
3-mercaptopyruvate sulfurtransferase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H5A5_CAUCN
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus
cn_combo_scaffold_3156_12
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13615..14697)
DNA (1083bp) protein (361aa)
Lysine-arginine-ornithine-binding periplasmic protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAZ0_PHEZH
lysine-arginine-ornithine-binding periplasmic protein; K09969 general L-amino acid transport system substrate-binding protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
lysine-arginine-ornithine-binding periplasmic protein
cn_combo_scaffold_3156_13
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14810..15973
DNA (1164bp) protein (388aa)
Cystathionine beta-lyase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAZ1_PHEZH
cystathionine beta-lyase
Cystathionine beta-lyase {ECO:0000313|EMBL:ACG78042.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacte
cn_combo_scaffold_3156_14
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16016..16348)
DNA (333bp) protein (111aa)
mRNA interferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIH0_9SPHN
PemK-like protein
PemK-like protein {ECO:0000313|EMBL:BAK67093.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.
cn_combo_scaffold_3156_15
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16345..16587)
DNA (243bp) protein (81aa)
PemI-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIH1_9SPHN
PbsX family transcriptional regulator {ECO:0000313|EMBL:EXS68051.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="S
PemI-like protein
cn_combo_scaffold_3156_trna_2
unknown

Not on your lists

comp(16691..16764)
DNA (74bp)
transferRNA
cn_combo_scaffold_3156_16
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16775..17080)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0EE10_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:ENZ79572.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter cresc
ETC complex I subunit
cn_combo_scaffold_3156_trna_1
unknown

Not on your lists

comp(17112..17185)
DNA (74bp)
transferRNA
cn_combo_scaffold_3156_17
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17256..17684)
DNA (429bp) protein (143aa)
Thioesterase superfamily protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXE9_PARL1
thioesterase superfamily protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
thioesterase superfamily protein
cn_combo_scaffold_3156_18
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17677..18084)
DNA (408bp) protein (136aa)
Putative uncharacterized protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VJ84_CAUST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG10172.1}; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source=
Displaying 20 items

View Taxonomy