ggKbase home page

cn_combo_scaffold_3423

Alias: PHE14_28

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3423_1
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..164
DNA (162bp) protein (54aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000255|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000255|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000255|HAMAP
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=RLMH_PHEZH
rRNA large subunit methyltransferase
cn_combo_scaffold_3423_2
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

196..1047
DNA (852bp) protein (284aa)
Peptidase, M23/M37 family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RD55_PHEZH
peptidase, M23/M37 family Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
peptidase, M23/M37 family
cn_combo_scaffold_3423_3
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1143..2549
DNA (1407bp) protein (469aa)
Carboxyl-terminal protease n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RD54_PHEZH
carboxyl-terminal protease
Carboxyl-terminal protease {ECO:0000313|EMBL:ACG76658.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobac
cn_combo_scaffold_3423_4
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2669..3835
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RD53_PHEZH
hypothetical protein; K09798 hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
hypothetical protein
cn_combo_scaffold_3423_5
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3836..4336
DNA (501bp) protein (167aa)
RNA pyrophosphohydrolase {ECO:0000255|HAMAP-Rule:MF_00298}; EC=3.6.1.- {ECO:0000255|HAMAP-Rule:MF_00298};; (Di)nucleoside polyphosphate hydrolase {ECO:0000255|HAMAP-Rule:MF_00298}; TaxID=190650 specie
RNA pyrophosphohydrolase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=RPPH_CAUCN
dinucleoside polyphosphate hydrolase
cn_combo_scaffold_3423_6
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4344..5108
DNA (765bp) protein (255aa)
Hydrolase, alpha/beta hydrolase fold family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RD51_PHEZH
alpha/beta hydrolase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
alpha/beta hydrolase
cn_combo_scaffold_3423_7
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5117..7048)
DNA (1932bp) protein (644aa)
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHB8_PHEZH
dipeptidyl aminopeptidase/acylaminoacyl-peptidase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
dipeptidyl aminopeptidase/acylaminoacyl-peptidase
cn_combo_scaffold_3423_8
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7117..7440)
DNA (324bp) protein (108aa)
Small multidrug resistance protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RD50_PHEZH
small multidrug resistance protein
Small multidrug resistance protein {ECO:0000313|EMBL:ACG76654.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Ph
cn_combo_scaffold_3423_9
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7556..8218)
DNA (663bp) protein (221aa)
dihydrolipoamide acetyltransferase n=1 Tax=Pseudomonas nitroreducens RepID=UPI000316A2CE
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_3423_10
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8384..8650)
DNA (267bp) protein (89aa)
ATP synthase epsilon chain n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RD48_PHEZH
atpC; ATP synthase F0F1 subunit epsilon
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxI
cn_combo_scaffold_3423_11
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8656..10215)
DNA (1560bp) protein (520aa)
atpD; ATP synthase F0F1 subunit beta; K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
ATP synthase subunit beta n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RD47_PHEZH
atpD; ATP synthase F0F1 subunit beta
cn_combo_scaffold_3423_12
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10234..11103)
DNA (870bp) protein (290aa)
ATP synthase gamma chain n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=ATPG_PHEZH
atpG; ATP synthase F0F1 subunit gamma
ATP synthase gamma chain {ECO:0000255|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000255|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000255|HAMAP-Rule:MF_00815}; TaxID=4508
cn_combo_scaffold_3423_13
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11123..12658)
DNA (1536bp) protein (512aa)
atpA; ATP synthase F0F1 subunit alpha; K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
ATP synthase subunit alpha n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=ATPA_PHEZH
atpA; ATP synthase F0F1 subunit alpha
cn_combo_scaffold_3423_14
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12663..13217)
DNA (555bp) protein (185aa)
ATP synthase subunit delta n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=ATPD_PHEZH
atpH; ATP synthase F1, delta subunit atpH
ATP synthase subunit delta {ECO:0000255|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000255|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000255|HAMAP-Rule:MF_01416}; S
cn_combo_scaffold_3423_15
unknown

Not on your lists

comp(13404..13703)
DNA (300bp) protein (100aa)

This feature has no annotations

cn_combo_scaffold_3423_16
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13891..14232)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RD42_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG76646.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
cn_combo_scaffold_3423_17
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14546..15544)
DNA (999bp) protein (333aa)
Putative transcriptional regulator n=1 Tax=Caulobacter sp. AP07 RepID=J2GPI4_9CAUL
Putative transcriptional regulator {ECO:0000313|EMBL:EJL32215.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulob
transcriptional regulator, MerR family
cn_combo_scaffold_3423_18
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15728..16606
DNA (879bp) protein (293aa)
Membrane carboxypeptidase (Penicillin-binding protein) n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RD41_PHEZH
membrane carboxypeptidase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
membrane carboxypeptidase
cn_combo_scaffold_3423_19
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16629..16823)
DNA (195bp) protein (65aa)
3-oxoacyl-ACP reductase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PYR7_9RHIZ
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:EKF57905.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
dehydrogenase
Displaying 19 items

View Taxonomy