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cn_combo_scaffold_3681

Alias: PHE14_32

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3681_1
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1994)
DNA (1992bp) protein (664aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI0003773BF5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIT06096.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas t
cn_combo_scaffold_3681_2
Burkholderia sp. CCGE1003, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1987..2661)
DNA (675bp) protein (225aa)
ABC transporter ATP-binding protein n=1 Tax=Burkholderia bryophila RepID=UPI00037EAB7C
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:ADN61760.1}; TaxID=640512 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholder
cn_combo_scaffold_3681_3
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2674..3465)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2W4M6_9BRAD
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_3681_4
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3551..4522)
DNA (972bp) protein (324aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002696}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002685};;
purC; phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
PREDICTED: phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C18753
cn_combo_scaffold_3681_5
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4646..5191
DNA (546bp) protein (182aa)
Peroxiredoxin n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAF2_PHEZH
peroxiredoxin Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
peroxiredoxin
cn_combo_scaffold_3681_6
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5203..5703)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI0003764803
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG77958.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
cn_combo_scaffold_3681_7
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5944..6306
DNA (363bp) protein (121aa)
30S ribosomal protein S6 n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAF0_PHEZH
30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylob
cn_combo_scaffold_3681_8
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6324..6605
DNA (282bp) protein (94aa)
30S ribosomal protein S18 n=1 Tax=Caulobacter sp. AP07 RepID=J3A6A1_9CAUL
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
rpsR; 30S ribosomal protein S18
cn_combo_scaffold_3681_9
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6619..7203
DNA (585bp) protein (195aa)
50S ribosomal protein L9 n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=RL9_PHEZH
rplI; 50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
rplI; 50S ribosomal protein L9
cn_combo_scaffold_3681_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7438..9840
DNA (2403bp) protein (801aa)
TonB-dependent receptor n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QMN0_BREDI
TonB-dependent receptor {ECO:0000313|EMBL:EKY28970.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas d
TonB-dependent receptor
cn_combo_scaffold_3681_11
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9997..10380
DNA (384bp) protein (128aa)
Replicative DNA helicase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAE7_PHEZH
replicative DNA helicase
Replicative DNA helicase {ECO:0000313|EMBL:ACG77954.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacte
cn_combo_scaffold_3681_12
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10530..11480
DNA (951bp) protein (317aa)
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
Replicative DNA helicase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAE7_PHEZH
replicative DNA helicase
cn_combo_scaffold_3681_13
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11516..12682)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SWK4_CAUSK
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_3681_14
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12819..14183
DNA (1365bp) protein (455aa)
DNA repair protein radA n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAE5_PHEZH
radA; DNA repair protein RadA
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobact
cn_combo_scaffold_3681_15
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14187..14807
DNA (621bp) protein (207aa)
colicin V production protein n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI00037D60F9
colicin V production protein
Colicin V production protein {ECO:0000313|EMBL:ABZ71630.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" so
cn_combo_scaffold_3681_16
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14804..16297
DNA (1494bp) protein (498aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
Amidophosphoribosyltransferase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAE3_PHEZH
amidophosphoribosyltransferase
cn_combo_scaffold_3681_17
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16353..17345
DNA (993bp) protein (331aa)
Predicted Na+-dependent transporter n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAE2_PHEZH
Na+-dependent transporter; K14347 solute carrier family 10 (sodium/bile acid cotransporter), member 7 Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
Na+-dependent transporter
cn_combo_scaffold_3681_18
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17338..18087
DNA (750bp) protein (250aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAE1_PHEZH
short-chain dehydrogenase/reductase SDR Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
short-chain dehydrogenase/reductase SDR
cn_combo_scaffold_3681_19
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18041..19669)
DNA (1629bp) protein (543aa)
GTPase Der n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAE0_PHEZH
engA; GTP-binding protein EngA; K03977 GTP-binding protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
engA; GTP-binding protein EngA
cn_combo_scaffold_3681_20
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19691..21082)
DNA (1392bp) protein (464aa)
PQQ enzyme repeat domain protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAD9_PHEZH
PQQ enzyme repeat domain-containing protein
PQQ enzyme repeat domain protein {ECO:0000313|EMBL:ACG77946.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phen
cn_combo_scaffold_3681_21
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21079..21840)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAD8_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG77945.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
cn_combo_scaffold_3681_22
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21937..22617)
DNA (681bp) protein (227aa)
Transcriptional regulator, TetR family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RE75_PHEZH
transcriptional regulator, TetR family Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
transcriptional regulator, TetR family
cn_combo_scaffold_3681_23
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22614..23873)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MQP6_9SPHN
sodium:dicarboxylate symporter Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
hypothetical protein rbh
cn_combo_scaffold_3681_24
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24038..24298
DNA (261bp) protein (87aa)
XRE family transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
cn_combo_scaffold_3681_25
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24295..25122)
DNA (828bp) protein (276aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000255|HAMAP-Rule:MF_00156}; EC=2.1.2.11 {ECO:0000255|HAMAP-Rule:MF_00156};; Ketopantoate hydroxymethyltransferase {ECO:0000255|HAMAP-Rule:MF_001
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=PANB_PHEZH
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase rbh
cn_combo_scaffold_3681_26
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25126..25506)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAD6_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG77943.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
cn_combo_scaffold_3681_27
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25499..25969)
DNA (471bp) protein (157aa)
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAD5_PHEZH
ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
ECF subfamily RNA polymerase sigma-70 factor
Displaying 27 items

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