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cn_combo_scaffold_4167

Alias: PHE14_37

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_4167_1
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1565
DNA (1563bp) protein (521aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S2V7_9SPHN
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_4167_2
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1584..3704)
DNA (2121bp) protein (707aa)
dcp; peptidyl-dipeptidase DCP; K01284 peptidyl-dipeptidase Dcp [EC:3.4.15.5] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
Peptidyl-dipeptidase DCP n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCD5_PHEZH
dcp; peptidyl-dipeptidase DCP
cn_combo_scaffold_4167_3
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3789..4448)
DNA (660bp) protein (220aa)
TetR family transcriptional regulator n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WXM4_9BURK
TetR family transcriptional regulator {ECO:0000313|EMBL:EON10840.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandor
Transcriptional regulator
cn_combo_scaffold_4167_4
unknown

Not on your lists

comp(4463..4735)
DNA (273bp) protein (91aa)

This feature has no annotations

cn_combo_scaffold_4167_5
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4899..5786
DNA (888bp) protein (296aa)
glutamate racemase; K01776 glutamate racemase [EC:5.1.1.3] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Caulobacter sp. (strain K31) RepID=MURI_CAUSK
cn_combo_scaffold_4167_6
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5806..6342)
DNA (537bp) protein (179aa)
alkylhydroperoxidase AhpD family (EC:1.11.1.15); K04756 alkyl hydroperoxide reductase subunit D Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
alkylhydroperoxidase AhpD family (EC:1.11.1.15)
Alkyl hydroperoxide reductase AhpD n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZT4_BREDI
cn_combo_scaffold_4167_7
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6520..7074)
DNA (555bp) protein (185aa)
ahpC; alkylhydroperoxide reductase C; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
PREDICTED: peroxiredoxin tpx1-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1439C
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
cn_combo_scaffold_4167_8
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7197..8096
DNA (900bp) protein (300aa)
Transcriptional regulator, LysR family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCD9_PHEZH
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACG76538.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source
cn_combo_scaffold_4167_9
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8175..8741
DNA (567bp) protein (189aa)
PadR family transcriptional regulator n=2 Tax=Rhodospirillum rubrum RepID=G2TDH0_RHORU
PadR family transcriptional regulator
Transcriptional regulator, PadR family {ECO:0000313|EMBL:ABC24235.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source
cn_combo_scaffold_4167_10
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8759..9046
DNA (288bp) protein (96aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SME6_HAHCH
hypothetical protein; K09956 hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
hypothetical protein
cn_combo_scaffold_4167_11
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(9064..9564)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00035EE54B
hypothetical protein
Tax=BJP_IG2157_Anaerolineales_55_23
cn_combo_scaffold_4167_12
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9564..11639)
DNA (2076bp) protein (692aa)
Serine protease of the peptidase family S9A n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCE0_PHEZH
Serine protease of the peptidase family S9A {ECO:0000313|EMBL:ACG76539.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" s
serine protease of the peptidase S9A
cn_combo_scaffold_4167_13
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11721..12548
DNA (828bp) protein (276aa)
dapF; diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Diaminopimelate epimerase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=DAPF_PHEZH
dapF; diaminopimelate epimerase
cn_combo_scaffold_4167_14
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12545..13855
DNA (1311bp) protein (437aa)
2-methylthioadenine synthetase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCE3_PHEZH
2-methylthioadenine synthetase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
2-methylthioadenine synthetase
cn_combo_scaffold_4167_15
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13882..14520)
DNA (639bp) protein (213aa)
Putative membrane protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0EBE7_CAUCE
Putative membrane protein {ECO:0000313|EMBL:ENZ82783.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter cre
hypothetical protein
cn_combo_scaffold_4167_16
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14570..15508
DNA (939bp) protein (313aa)
Signal recognition particle receptor FtsY n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCE6_PHEZH
ftsY; signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria;
cn_combo_scaffold_4167_17
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15505..16116
DNA (612bp) protein (204aa)
Probable intracellular septation protein A n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCE7_PHEZH
intracellular septation protein A
Probable intracellular septation protein A {ECO:0000256|HAMAP-Rule:MF_00189, ECO:0000256|SAAS:SAAS00082307}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulo
cn_combo_scaffold_4167_18
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16228..16797
DNA (570bp) protein (190aa)
Transcriptional regulator, MarR family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCE8_PHEZH
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACG76547.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source
cn_combo_scaffold_4167_19
unknown

Not on your lists

comp(16801..17016)
DNA (216bp) protein (72aa)

This feature has no annotations

cn_combo_scaffold_4167_20
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17101..17619)
DNA (519bp) protein (173aa)
Thiol:disulfide interchange protein CycY n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCF0_PHEZH
cycY; thiol:disulfide interchange protein CycY
Thiol:disulfide interchange protein CycY {ECO:0000313|EMBL:ACG76549.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" sour
cn_combo_scaffold_4167_21
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17616..17759)
DNA (144bp) protein (48aa)
Uncharacterized protein {ECO:0000313|EMBL:GAD59542.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas a
cn_combo_scaffold_4167_22
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17761..18489)
DNA (729bp) protein (243aa)
Heme ABC transporter, permease protein (Involved in cytochrome-c biogenesis) n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCF1_PHEZH
ccmC; heme ABC transporter permease rbh
Heme ABC transporter, permease protein (Involved in cytochrome-c biogenesis) {ECO:0000313|EMBL:ACG76550.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulob
cn_combo_scaffold_4167_23
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18617..19114)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXK1_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU43789.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.
cn_combo_scaffold_4167_24
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19186..19851)
DNA (666bp) protein (222aa)
Heme exporter protein B n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCF4_PHEZH
ccmB; heme exporter protein CcmB
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobact
cn_combo_scaffold_4167_25
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19848..20450)
DNA (603bp) protein (201aa)
ccmA; cytochrome c biogenesis ATP-binding export protein CcmA (EC:3.6.3.41)
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000255|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000255|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000255|HAMAP-Rule:MF_01707}; Ta
Cytochrome c biogenesis ATP-binding export protein CcmA n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=CCMA_CAUCR
cn_combo_scaffold_4167_26
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20662..23346
DNA (2685bp) protein (895aa)
acnA; aconitate hydratase; K01681 aconitate hydratase 1 [EC:4.2.1.3] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
Aconitate hydratase 1 n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCF6_PHEZH
acnA; aconitate hydratase
cn_combo_scaffold_4167_27
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23505..24197
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCF7_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG76556.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
cn_combo_scaffold_4167_28
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24519..24854
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCF8_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG76557.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
Displaying 28 items

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