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cn_combo_scaffold_4870

Alias: PHE14_58

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_4870_1
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..668
DNA (666bp) protein (222aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR
Phospho-2-dehydro-3-deoxyheptonate aldolase n=37 Tax=Bordetella RepID=F4L9N2_BORPC
aroG; phospho-2-dehydro-3-deoxyheptonate aldolase
cn_combo_scaffold_4870_2
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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733..1950
DNA (1218bp) protein (406aa)
Beta-lactamase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RB65_PHEZH
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ACG79710.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucin
cn_combo_scaffold_4870_3
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1947..3380)
DNA (1434bp) protein (478aa)
Nitrogen regulation protein NR(I) n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBU4_PHEZH
glnG; nitrogen regulation protein NR(I); K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
glnG; nitrogen regulation protein NR(I)
cn_combo_scaffold_4870_4
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3377..4492)
DNA (1116bp) protein (372aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae;
Nitrogen regulation protein NR(II) n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBU5_PHEZH
glnL; nitrogen regulation protein NR(II)
cn_combo_scaffold_4870_5
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4489..5496)
DNA (1008bp) protein (336aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Cauloba
tRNA-dihydrouridine synthase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBU6_PHEZH
nifR3; tRNA-dihydrouridine synthase, nifR3
cn_combo_scaffold_4870_6
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5587..6732
DNA (1146bp) protein (382aa)
Bifunctional enzyme IspD/IspF n=1 Tax=Caulobacter sp. AP07 RepID=J2HA22_9CAUL
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales
ispDF; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
cn_combo_scaffold_4870_7
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6729..8966)
DNA (2238bp) protein (746aa)
Putative spermine/spermidine synthase protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBU8_PHEZH
spermine/spermidine synthase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
spermine/spermidine synthase
cn_combo_scaffold_4870_8
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9049..9540
DNA (492bp) protein (164aa)
Competence/damage-inducible protein CinA n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBU9_PHEZH
competence/damage-inducible protein CinA
Competence/damage-inducible protein CinA {ECO:0000313|EMBL:ACG78146.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" sour
cn_combo_scaffold_4870_9
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9537..10052)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBV0_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_4870_10
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9991..10953)
DNA (963bp) protein (321aa)
lipA; lipoyl synthase; K03644 lipoic acid synthetase [EC:2.8.1.8] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Lipoyl synthase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=LIPA_PHEZH
lipA; lipoyl synthase
cn_combo_scaffold_4870_11
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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11031..12053
DNA (1023bp) protein (341aa)
lysophospholipase L2 (EC:3.1.1.5)
Lysophospholipase L2 n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8GW81_CAUCN
Lysophospholipase L2, putative {ECO:0000313|EMBL:AAK23710.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter
cn_combo_scaffold_4870_12
unknown

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12025..12087
DNA (63bp) protein (21aa)

This feature has no annotations

Displaying 12 items

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