ggKbase home page

cn_combo_scaffold_5082

Alias: PHE14_59

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_5082_1
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..703)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2ZR97_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL21344.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source
cn_combo_scaffold_5082_2
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(851..2017)
DNA (1167bp) protein (389aa)
Aminotransferase, class I n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RA39_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_5082_3
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2058..2519
DNA (462bp) protein (154aa)
Histone acetyltransferase HPA2 n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RA38_PHEZH
histone acetyltransferase HPA2
Histone acetyltransferase HPA2 {ECO:0000313|EMBL:ACG79542.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenyl
cn_combo_scaffold_5082_4
Fulvimarina pelagi, Fulvimarina, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2529..2873)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G3Z4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EAU41687.1}; TaxID=314231 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Fulvimarina.;" source="Fulvimarina pelagi HT
response regulator receiver domain-containing protein
cn_combo_scaffold_5082_5
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2887..4185)
DNA (1299bp) protein (433aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae
Two-component sensor histidine kinase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P586_AZOS1
two-component sensor histidine kinase
cn_combo_scaffold_5082_6
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4196..6031)
DNA (1836bp) protein (612aa)
PREDICTED: translation factor GUF1, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1883D
GTP-binding protein TypA; K06207 GTP-binding protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
GTP-binding protein TypA/BipA
cn_combo_scaffold_5082_7
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6429..7712
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0D413_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:ENZ83356.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter cresc
hypothetical protein
cn_combo_scaffold_5082_8
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7727..8236
DNA (510bp) protein (170aa)
polypeptide deformylase; K01462 peptide deformylase [EC:3.5.1.88] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Peptide deformylase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=DEF_PHEZH
polypeptide deformylase
cn_combo_scaffold_5082_9
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8303..8632)
DNA (330bp) protein (110aa)
Protein tyrosine phosphatase (Fragment) n=1 Tax=Monosiga ovata RepID=E5RKE0_9EUKA
Uncharacterized protein {ECO:0000313|EMBL:KGB54518.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
Putative secreted protein
cn_combo_scaffold_5082_10
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8724..9650
DNA (927bp) protein (309aa)
fmt; methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Methionyl-tRNA formyltransferase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=FMT_PHEZH
fmt; methionyl-tRNA formyltransferase
cn_combo_scaffold_5082_11
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9650..10387
DNA (738bp) protein (246aa)
truA; tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
PREDICTED: tRNA pseudouridine synthase-like 1-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1AEFB
truA; tRNA pseudouridine synthase A
cn_combo_scaffold_5082_12
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10426..11568)
DNA (1143bp) protein (381aa)
dapE; succinyl-diaminopimelate desuccinylase; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
Succinyl-diaminopimelate desuccinylase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=DAPE_PHEZH
dapE; succinyl-diaminopimelate desuccinylase
cn_combo_scaffold_5082_13
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11753..12388
DNA (636bp) protein (212aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
cn_combo_scaffold_5082_14
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12393..12884)
DNA (492bp) protein (164aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
cn_combo_scaffold_5082_15
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13227..14057)
DNA (831bp) protein (277aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; K00674 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase [EC:2.3.1.117] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_6
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDU9_PHEZH
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase
Displaying 15 items

View Taxonomy