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cn_combo_scaffold_5815

Alias: PHE14_74

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_5815_1
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1238
DNA (1236bp) protein (412aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3)
PAS domain S-box n=1 Tax=Caulobacter sp. AP07 RepID=J3A7F7_9CAUL
PAS domain S-box {ECO:0000313|EMBL:EJL27671.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulo
cn_combo_scaffold_5815_2
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1487..2206
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003657832
regulatory protein LuxR
Regulatory protein LuxR {ECO:0000313|EMBL:ABS13395.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (st
cn_combo_scaffold_5815_3
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2342..3943
DNA (1602bp) protein (534aa)
AMP-dependent synthetase and ligase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HV87_PARL1
acyl-CoA synthetase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABS63820.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum
cn_combo_scaffold_5815_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

4107..4688
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003778D0D
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
cn_combo_scaffold_5815_5
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4703..6001)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBC8_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG79773.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
cn_combo_scaffold_5815_6
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6206..7438
DNA (1233bp) protein (411aa)
Phosphate-specific outer membrane porin OprP , Pyrophosphate-specific outer membrane porin OprO n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3G5V0_STEMA
Phosphate selective porin {ECO:0000313|EMBL:EYR69508.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsi
phosphate selective porin
cn_combo_scaffold_5815_7
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7550..8827)
DNA (1278bp) protein (426aa)
Cytochrome P450 n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T9L7_CAUSK
cytochrome P450
Cytochrome P450 {ECO:0000313|EMBL:ABZ74416.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K3
cn_combo_scaffold_5815_8
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9000..10094
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003734096
NADH:flavin oxidoreductase/NADH oxidase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
NADH:flavin oxidoreductase rbh
cn_combo_scaffold_5815_9
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10342..11253)
DNA (912bp) protein (304aa)
Gluconolactonase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGA5_PHEZH
gluconolactonase
Gluconolactonase {ECO:0000313|EMBL:ACG77229.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zuc
cn_combo_scaffold_5815_10
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11316..11834)
DNA (519bp) protein (173aa)
folA; dihydrofolate reductase; K00287 dihydrofolate reductase [EC:1.5.1.3] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
Dihydrofolate reductase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGA7_PHEZH
folA; dihydrofolate reductase
cn_combo_scaffold_5815_11
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11856..13229)
DNA (1374bp) protein (458aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001013-D04 RepID=UPI00037AAEDE
integral membrane sensor signal transduction histidine kinase
cn_combo_scaffold_5815_12
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13226..13909)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001013-D04 RepID=UPI00037C4634
Response regulator in two-component regulatory system with PhoQ {ECO:0000313|EMBL:EKV28152.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae
two-component system OmpR family response regulator
cn_combo_scaffold_5815_13
unknown

Not on your lists

comp(14013..14243)
DNA (231bp) protein (77aa)

This feature has no annotations

cn_combo_scaffold_5815_14
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14342..15172)
DNA (831bp) protein (277aa)
thyA; thymidylate synthase; K00560 thymidylate synthase [EC:2.1.1.45] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
Thymidylate synthase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGA9_PHEZH
thyA; thymidylate synthase
cn_combo_scaffold_5815_15
unknown

Not on your lists

15342..15638
DNA (297bp) protein (99aa)

This feature has no annotations

cn_combo_scaffold_5815_16
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15643..16197)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2GM38_9CAUL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJL31265.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. A
cn_combo_scaffold_5815_17
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16403..17422
DNA (1020bp) protein (340aa)
ilvC; ketol-acid reductoisomerase; K00053 ketol-acid reductoisomerase [EC:1.1.1.86] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
Ketol-acid reductoisomerase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=ILVC_PHEZH
ilvC; ketol-acid reductoisomerase
cn_combo_scaffold_5815_18
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17491..18177)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFQ2_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG77133.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
cn_combo_scaffold_5815_19
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18538..19911
DNA (1374bp) protein (458aa)
trehalose-6-phosphate synthase; K00697 trehalose 6-phosphate synthase [EC:2.4.1.15] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
alpha,alpha-trehalose-phosphate synthase n=1 Tax=Caulobacter sp. JGI 0001013-D04 RepID=UPI000373FFF8
trehalose-6-phosphate synthase
cn_combo_scaffold_5815_20
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19959..20393
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RF59_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG78629.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
Displaying 20 items

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