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cn_combo_scaffold_3151

Alias: PHE14_231

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3151_1
uncultured gamma proteobacterium EB000_65A11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..665
DNA (663bp) protein (221aa)
Acyl-CoA dehydrogenases n=1 Tax=uncultured gamma proteobacterium EB000_65A11 RepID=E0Y009_9GAMM
Acyl-CoA dehydrogenases {ECO:0000313|EMBL:ADI20000.1}; TaxID=710972 species="Bacteria; Proteobacteria; Gammaproteobacteria; environmental samples.;" source="uncultured gamma proteobacterium EB000_65A1
acyl-CoA dehydrogenase
cn_combo_scaffold_3151_2
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(828..2639)
DNA (1812bp) protein (604aa)
Sulfatase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IFP8_9SPHN
sulfatase
Sulfatase {ECO:0000313|EMBL:CCA91123.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;
cn_combo_scaffold_3151_3
unknown

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comp(2720..2929)
DNA (210bp) protein (70aa)

This feature has no annotations

cn_combo_scaffold_3151_4
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2994..5369)
DNA (2376bp) protein (792aa)
Chemotaxis methyltransferase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JMT0_AGRRK
Uncharacterized protein {ECO:0000313|EMBL:KDP73352.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="E
sensor histidine kinase protein
cn_combo_scaffold_3151_5
Mesorhizobium sp. LSHC426A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5631..5984)
DNA (354bp) protein (118aa)
UPI0003CEE051 related cluster n=1 Tax=unknown RepID=UPI0003CEE051
Response regulator receiver {ECO:0000313|EMBL:ESX49339.1}; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium
cn_combo_scaffold_3151_6
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6054..6815)
DNA (762bp) protein (254aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R837_PHEZH
CarD family transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
CarD family transcriptional regulator
cn_combo_scaffold_3151_7
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6812..7822)
DNA (1011bp) protein (337aa)
PAS domain S-box n=1 Tax=Microvirga sp. WSM3557 RepID=I4YT63_9RHIZ
PAS domain S-box {ECO:0000313|EMBL:EIM27155.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
putative chemotaxis protein methyltransferase
cn_combo_scaffold_3151_8
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8061..9407
DNA (1347bp) protein (449aa)
Glutamate dehydrogenase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R8T2_PHEZH
gdhA; glutamate dehydrogenase
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobact
cn_combo_scaffold_3151_9
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9558..10304)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NF28_9SPHN
20S proteasome subunits A and B
Peptidase {ECO:0000313|EMBL:EXS69252.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
cn_combo_scaffold_3151_10
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10324..11163)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HIX9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB12103.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium qui
transglutaminase
cn_combo_scaffold_3151_11
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11165..12100)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NF30_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB14057.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lac
hypothetical protein
cn_combo_scaffold_3151_12
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12102..13511)
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HEP5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KFG89872.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium her
hypothetical protein
cn_combo_scaffold_3151_13
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13745..14527)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000311415D
Uncharacterized protein {ECO:0000313|EMBL:ETR76660.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
cn_combo_scaffold_3151_14
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14611..15612)
DNA (1002bp) protein (334aa)
cytochrome-c peroxidase (EC:1.11.1.5)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HKA7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA98023.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium bad
cn_combo_scaffold_3151_15
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15623..16210)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI000377293C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ67558.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wi
cn_combo_scaffold_3151_16
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16362..16616
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X517_OCHA4
Uncharacterized protein {ECO:0000313|EMBL:EYR84578.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
cn_combo_scaffold_3151_17
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16649..17821)
DNA (1173bp) protein (391aa)
Carboxynorspermidine/carboxyspermidine decarboxylase {ECO:0000256|PIRNR:PIRNR038941}; Short=CANS DC/CAS DC {ECO:0000256|PIRNR:PIRNR038941};; Short=CANSDC/CASDC {ECO:0000256|PIRNR:PIRNR038941};; EC=4.1
Carboxynorspermidine/carboxyspermidine decarboxylase n=1 Tax=Caulobacter sp. AP07 RepID=J3ASM5_9CAUL
Orn/DAP/Arg decarboxylase 2
cn_combo_scaffold_3151_18
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17829..18107)
DNA (279bp) protein (93aa)
putative saccharopine dehydrogenase (EC:1.5.1.-)
Saccharopine dehydrogenase n=1 Tax=Sphingobium lactosutens DS20 RepID=T0H4M8_9SPHN
Saccharopine dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:EJL36533.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" so
Displaying 18 items

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