ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

cn_combo_scaffold_1220_12

Organism: CN-SCN_Phenylobacterium_14x

near complete RP 44 / 55 MC: 2 BSCG 42 / 51 MC: 2 ASCG 7 / 38
Location: comp(12243..12986)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCJ1_PHEZH similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 237.0
  • Bit_score: 342
  • Evalue 2.60e-91
transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 238.0
  • Bit_score: 344
  • Evalue 1.60e-91
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 71.7
  • Coverage: 237.0
  • Bit_score: 342
  • Evalue 7.30e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Brevundimonas_70_19 → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 744
ATGAAGCAGATCTCCATGCGACGCGCCGACCGCCTGTTCCAGATCATTCAGATCCTGCGCCGGGCGCGCGCCCCGATCACCGCCGACGCCATCGCCGAGGAGCTGGAGACCTCCAAGCGCACGGTCTATCGCGACATCGCCACCCTGATGGGCCAGAGGGTGCCGATCCGCGGCGAGGCGGGCATGGGCTATGTGCTGGACCAGGGTTTCGACCTGCCGCCGCTGATGCTGACCCCCGACGAGATCGAGGCGGCGGTGCTGGGCGCCCAGTGGGTGGCCAGCCGGGGCGACCCGTCCCTGGCGCGCGCGGCCCAGGACCTGATCGCAAAGATCGGCGCCTCGGTGCCCGAGCGGCTGCGTCCCTATGTGCTGGAGCCGGCGGGGCGCGCGGTGCCGGCCTGGCGCGCGGCGGCGCCCGACCAACTCGACATGGCCCAGGTGCGGGCGGCGATCCATGGCGGGCGCAAGCTCTCGCTGCGCTATCGCGACGAGCAGGAGCGCGAGACCGAGCGGGTCATCTGGCCGGTGACGGTCGGCTATCACGAGACGGTGCGCATCCTGGTCGGCTGGTGCGAACTGCGCGCGGCCTTCCGCAACTTCCGCACCGACCGGGTGGTGGCCTGCGACTTCCTGGAGGCGCGCTATCCCGAGCGTCCGGCGCTGCTGCGCGCCCGCTGGCGGGTCGAGCGCGAGGCGGAGGGCCGGCGGCATCTGGAGAAGATGCGGCCTGACGCCCCGGCCTGA
PROTEIN sequence
Length: 248
MKQISMRRADRLFQIIQILRRARAPITADAIAEELETSKRTVYRDIATLMGQRVPIRGEAGMGYVLDQGFDLPPLMLTPDEIEAAVLGAQWVASRGDPSLARAAQDLIAKIGASVPERLRPYVLEPAGRAVPAWRAAAPDQLDMAQVRAAIHGGRKLSLRYRDEQERETERVIWPVTVGYHETVRILVGWCELRAAFRNFRTDRVVACDFLEARYPERPALLRARWRVEREAEGRRHLEKMRPDAPA*