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cn_combo_scaffold_1220

Alias: PHE14_1

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Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1220_1
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

449..613
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI00036C8D17
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYD76115.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrob
cn_combo_scaffold_1220_2
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

623..1108
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SMI1_METPP
Uncharacterized protein {ECO:0000313|EMBL:EXS68202.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
hypothetical protein
cn_combo_scaffold_1220_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1105..2217
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Methylomicrobium buryatense RepID=UPI00034580EB
site-specific recombinase XerD-like protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
site-specific recombinase XerD-like protein
cn_combo_scaffold_1220_4
Jannaschia sp. CCS1, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2252..3247
DNA (996bp) protein (332aa)
2-nitropropane dioxygenase NPD n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28TA4_JANSC
2-nitropropane dioxygenase
2-nitropropane dioxygenase NPD {ECO:0000313|EMBL:ABD54058.1}; TaxID=290400 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia s
cn_combo_scaffold_1220_5
Acetobacter aceti, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3285..5093
DNA (1809bp) protein (603aa)
mod; type III restriction-modification system RcaSBIIP Mod subunit (EC:2.1.1.72)
Type III restriction-modification system RcaSBIIP, Mod subunit n=4 Tax=Rhodobacter capsulatus RepID=D5ASC6_RHOCB
DNA methylase {ECO:0000313|EMBL:KDE19123.1}; TaxID=1457393 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; Acetobacter subgen. Acetobacter.;" s
cn_combo_scaffold_1220_6
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5094..7730
DNA (2637bp) protein (879aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus caldus (strain SM-1) RepID=F9ZMZ0_ACICS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK57899.1}; TaxID=990288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acid
cn_combo_scaffold_1220_7
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7918..8535
DNA (618bp) protein (206aa)
3'-5' exonuclease; K03684 ribonuclease D [EC:3.1.13.5] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
Ribonuclease D n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCI6_PHEZH
ribonuclease D
cn_combo_scaffold_1220_8
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8543..9160
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCI7_PHEZH
hypothetical protein; K11719 lipopolysaccharide export system protein LptC Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
hypothetical protein
cn_combo_scaffold_1220_9
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9198..9764
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCI8_PHEZH
hypothetical protein; K09774 lipopolysaccharide export system protein LptA Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
hypothetical protein
cn_combo_scaffold_1220_10
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9775..10539
DNA (765bp) protein (255aa)
ABC transporter, ATP-binding protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCI9_PHEZH
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ACG76588.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="
cn_combo_scaffold_1220_11
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10576..12066)
DNA (1491bp) protein (497aa)
Myeloperoxidase thyroid peroxidase cyclooxygenase catalytic subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWA8_9SPHN
myeloperoxidase thyroid peroxidase cyclooxygenase catalytic subunit Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
peroxidase
cn_combo_scaffold_1220_12
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12243..12986)
DNA (744bp) protein (248aa)
Transcriptional regulator n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCJ1_PHEZH
transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
transcriptional regulator
cn_combo_scaffold_1220_13
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13170..14657
DNA (1488bp) protein (496aa)
RNA polymerase sigma-54 factor n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCJ3_PHEZH
rpoN; RNA polymerase factor sigma-54
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phen
cn_combo_scaffold_1220_14
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14654..15787)
DNA (1134bp) protein (378aa)
Epoxyqueuosine reductase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBA4_PHEZH
(Fe-S)-binding protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
(Fe-S)-binding protein
cn_combo_scaffold_1220_15
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15768..16454)
DNA (687bp) protein (229aa)
glutathione S-transferase; K00799 glutathione S-transferase [EC:2.5.1.18] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
Glutathione S-transferase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBA3_PHEZH
glutathione S-transferase
cn_combo_scaffold_1220_16
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16510..17307)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2HLY1_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL36758.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. A
oxidoreductase
cn_combo_scaffold_1220_17
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17310..17873)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J3ASZ5_9CAUL
carboxymuconolactone decarboxylase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
carboxymuconolactone decarboxylase
cn_combo_scaffold_1220_18
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17963..18286)
DNA (324bp) protein (108aa)
Putative transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4YM92_9RHIZ
Putative transcriptional regulator {ECO:0000313|EMBL:EIM25084.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirg
Transcriptional regulator, ArsR family
cn_combo_scaffold_1220_19
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18333..18809
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YM93_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM25085.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononid
hypothetical protein
cn_combo_scaffold_1220_20
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18881..19405
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RJH3_ACCPU
Uncharacterized protein {ECO:0000313|EMBL:KFB76700.1}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
hypothetical protein
cn_combo_scaffold_1220_21
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19631..20137)
DNA (507bp) protein (169aa)
FKBP-type peptidyl-prolyl cis-trans isomerase; K03773 FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBA8_PHEZH
FKBP-type peptidyl-prolyl cis-trans isomerase
cn_combo_scaffold_1220_22
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20151..21353)
DNA (1203bp) protein (401aa)
threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
Threonine dehydratase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBA9_PHEZH
threonine dehydratase
cn_combo_scaffold_1220_23
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21439..22521)
DNA (1083bp) protein (361aa)
Protein involved in cellulose biosynthesis (CelD) n=1 Tax=Caulobacter crescentus OR37 RepID=R0ELK7_CAUCE
cellulose biosynthesis protein CelD Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
cellulose biosynthesis protein CelD
cn_combo_scaffold_1220_24
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22603..23703)
DNA (1101bp) protein (367aa)
manC; mannose-1-phosphate guanylyltransferase (EC:2.7.7.22)
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:ACI97621.1}; EC=2.7.7.22 {ECO:0000313|EMBL:ACI97621.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales
Mannose-1-phosphate guanylyltransferase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IQ85_RHOCS
cn_combo_scaffold_1220_25
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23773..24288
DNA (516bp) protein (172aa)
histidinol-phosphate phosphatase; K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBB0_PHEZH
histidinol-phosphate phosphatase
cn_combo_scaffold_1220_26
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24285..25205
DNA (921bp) protein (307aa)
gldA; ABC transporter-like protein (EC:3.6.3.25)
ABC transporter related protein {ECO:0000313|EMBL:AEK62772.1}; EC=3.6.3.25 {ECO:0000313|EMBL:AEK62772.1};; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxaloba
ABC transporter related protein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0ACH7_COLFT
cn_combo_scaffold_1220_27
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25202..26533
DNA (1332bp) protein (444aa)
Putative uncharacterized protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WPK9_GEOS8
hypothetical protein Tax=GWD2_Desulfuromonadales_61_12_curated
hypothetical protein
cn_combo_scaffold_1220_28
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26530..28149)
DNA (1620bp) protein (540aa)
ATP-dependent DNA ligase n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI000365C4BA
ATP dependent DNA ligase
ATP dependent DNA ligase {ECO:0000313|EMBL:ADG12504.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segni
cn_combo_scaffold_1220_29
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28149..29159)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBB2_PHEZH
hypothetical protein; K07577 putative mRNA 3-end processing factor Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_1220_30
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29186..29707
DNA (522bp) protein (174aa)
Uncharacterized protein, possibly involved in aromatic compounds catabolism n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBB3_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
hypothetical protein
Displaying items 1-30 of 45 in total

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