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CN-SCN_Phenylobacterium_14x

CN-SCN_Caulobacterales_69_14
In projects: CN-SCN  |  SCN_92

Consensus taxonomy: Caulobacterales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: CN-SCN_Unknown

Properties

Avg. coverage: 13.94 Longest contig: 40.95 Kbp Bin length: 2.69 Mbp GC content: 69.19 %
Contigs count: 245 Features count: 2861 rRNAs count: 0 tRNAs count: 30

Genome completeness

near complete RP 44 / 55 MC: 2 BSCG 42 / 51 MC: 2 ASCG 7 / 38

Description

Partial 44

Displaying items 101-150 of 245 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_6282 PHE14_90
Order: Caulobacterales (100%)
20 9601 bp 65.90 15.31 94.43
cn_combo_scaffold_6312 PHE14_91
Order: Caulobacterales (75%)
8 9567 bp 72.39 14.61 95.77
cn_combo_scaffold_9593 PHE14_154
Species: R_Phenylobacterium_69_31 (50%)
8 9550 bp 70.16 14.10 90.41
cn_combo_scaffold_6328 PHE14_92
Order: Caulobacterales (81.82%)
11 9546 bp 70.23 14.98 91.86
cn_combo_scaffold_6357 PHE14_94
Species: R_Phenylobacterium_70_10 (55.56%)
9 9510 bp 70.43 13.79 96.72
cn_combo_scaffold_6381 PHE14_95
Order: Caulobacterales (80%)
15 9475 bp 69.42 14.60 88.56
cn_combo_scaffold_6405 PHE14_96
Order: Caulobacterales (90.91%)
11 9435 bp 70.84 14.54 93.42
cn_combo_scaffold_6447 PHE14_97
Species: Caulobacter segnis (71.43%)
7 9382 bp 69.42 13.04 91.13
cn_combo_scaffold_6451 PHE14_98
Order: Caulobacterales (81.82%)
11 9372 bp 70.70 13.55 96.03
cn_combo_scaffold_6654 PHE14_100
Order: Caulobacterales (80%)
10 9132 bp 69.57 16.95 91.62
cn_combo_scaffold_6671 PHE14_101
Order: Caulobacterales (90.91%)
11 9116 bp 67.41 14.24 89.18
cn_combo_scaffold_6686 PHE14_102
Order: Caulobacterales (83.33%)
12 9104 bp 70.44 15.34 85.08
cn_combo_scaffold_6696 PHE14_233
Order: Caulobacterales (50%)
8 9089 bp 68.98 14.02 89.25
cn_combo_scaffold_6740 PHE14_103
Order: Caulobacterales (100%)
9 9032 bp 69.28 14.98 90.58
cn_combo_scaffold_6749 PHE14_104
Genus: Caulobacter (50%)
8 9021 bp 62.02 9.33 89.16
cn_combo_scaffold_12395 PHE14_215
Order: Caulobacterales (72.73%)
11 8930 bp 69.00 14.11 89.90
cn_combo_scaffold_6978 PHE14_106
Order: Caulobacterales (90.91%)
11 8758 bp 69.92 14.71 88.24
cn_combo_scaffold_7088 PHE14_107
Order: Caulobacterales (80%)
10 8616 bp 70.24 14.44 89.28
cn_combo_scaffold_7123 PHE14_108
Order: Caulobacterales (90%)
10 8579 bp 69.54 15.40 90.43
cn_combo_scaffold_7147 PHE14_234
Class: Alphaproteobacteria (87.5%)
8 8554 bp 68.96 13.97 95.22
cn_combo_scaffold_7174 PHE14_109
Order: Caulobacterales (100%)
9 8522 bp 67.60 14.39 90.19
cn_combo_scaffold_7186 PHE14_110
Order: Caulobacterales (55.56%)
9 8512 bp 71.24 13.75 89.27
cn_combo_scaffold_7234 PHE14_111
Order: Caulobacterales (83.33%)
6 8469 bp 69.11 14.54 91.04
cn_combo_scaffold_11982 PHE14_208
Order: Caulobacterales (70%)
10 8454 bp 69.77 14.24 92.80
cn_combo_scaffold_7260 PHE14_112
Order: Caulobacterales (88.89%)
9 8437 bp 72.75 13.69 95.69
cn_combo_scaffold_7310 PHE14_113
Order: Caulobacterales (100%)
9 8388 bp 68.91 14.57 92.20
cn_combo_scaffold_7350 PHE14_114
Order: Caulobacterales (88.89%)
9 8348 bp 67.73 12.94 92.11
cn_combo_scaffold_7425 PHE14_116
Species: Phenylobacterium zucineum (75%)
8 8285 bp 68.55 15.47 94.33
cn_combo_scaffold_7438 PHE14_117
Species: Sphingopyxis sp. MC1 (50%)
6 8270 bp 60.18 19.23 83.33
cn_combo_scaffold_7460 PHE14_235
Order: Caulobacterales (57.14%)
7 8254 bp 71.07 15.73 94.10
cn_combo_scaffold_7475 PHE14_118
Species: Phenylobacterium zucineum (54.55%)
11 8240 bp 69.93 14.22 92.18
cn_combo_scaffold_8914 PHE14_143
Genus: Caulobacter (50%)
8 8225 bp 70.87 13.47 90.71
cn_combo_scaffold_11682 PHE14_201
Order: Caulobacterales (87.5%)
8 8166 bp 70.81 14.95 86.33
cn_combo_scaffold_7545 PHE14_229
Phylum: Proteobacteria (57.14%)
7 8163 bp 68.49 10.56 83.09
cn_combo_scaffold_12012 PHE14_210
Species: R_Phenylobacterium_69_31 (50%)
10 8155 bp 67.53 13.34 90.75
cn_combo_scaffold_7610 PHE14_119
Order: Caulobacterales (90%)
10 8110 bp 68.05 12.91 90.96
cn_combo_scaffold_7614 PHE14_121
Species: R_Phenylobacterium_70_10 (55.56%)
9 8105 bp 66.47 15.10 97.61
cn_combo_scaffold_7680 PHE14_122
Species: Caulobacter sp. K31 (80%)
5 8030 bp 62.08 10.93 99.53
cn_combo_scaffold_7705 PHE14_123
Order: Caulobacterales (77.78%)
9 8010 bp 66.90 13.73 87.82
cn_combo_scaffold_7773 PHE14_124
Class: Alphaproteobacteria (66.67%)
6 7959 bp 64.44 10.53 87.26
cn_combo_scaffold_7835 PHE14_125
Order: Caulobacterales (90%)
10 7904 bp 68.72 15.11 96.10
cn_combo_scaffold_7880 PHE14_126
Genus: Caulobacter (54.55%)
11 7858 bp 71.29 14.23 89.26
cn_combo_scaffold_12915 PHE14_243
Order: Caulobacterales (53.85%)
13 7857 bp 66.48 10.83 90.11
cn_combo_scaffold_7884 PHE14_127
Genus: Caulobacter (57.14%)
7 7856 bp 67.20 13.73 89.59
cn_combo_scaffold_8038 PHE14_129
Order: Caulobacterales (100%)
8 7738 bp 68.13 15.86 84.05
cn_combo_scaffold_8064 PHE14_130
Order: Caulobacterales (100%)
9 7712 bp 71.89 14.25 97.52
cn_combo_scaffold_8119 PHE14_131
Order: Caulobacterales (66.67%)
9 7660 bp 69.71 14.07 91.92
cn_combo_scaffold_8122 PHE14_132
Order: Caulobacterales (61.54%)
13 7657 bp 67.77 13.74 88.59
cn_combo_scaffold_8218 PHE14_236
Class: Alphaproteobacteria (70%)
10 7583 bp 66.79 11.78 86.36
cn_combo_scaffold_13147 PHE14_220
Genus: Caulobacter (54.55%)
11 7476 bp 71.20 13.23 81.94
Displaying items 101-150 of 245 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.