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CN-SCN_Phenylobacterium_14x

CN-SCN_Caulobacterales_69_14
In projects: CN-SCN  |  SCN_92

Consensus taxonomy: Caulobacterales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: CN-SCN_Unknown

Properties

Avg. coverage: 13.94 Longest contig: 40.95 Kbp Bin length: 2.69 Mbp GC content: 69.19 %
Contigs count: 245 Features count: 2861 rRNAs count: 0 tRNAs count: 30

Genome completeness

near complete RP 44 / 55 MC: 2 BSCG 42 / 51 MC: 2 ASCG 7 / 38

Description

Partial 44

Displaying items 1-50 of 245 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_1220 PHE14_1
Order: Caulobacterales (62.22%)
45 40951 bp 69.57 15.01 92.61
cn_combo_scaffold_2043 PHE14_7
Order: Caulobacterales (75.68%)
37 35477 bp 66.47 13.18 89.16
cn_combo_scaffold_1425 PHE14_2
Order: Caulobacterales (76.47%)
34 36230 bp 69.17 13.94 88.47
cn_combo_scaffold_1831 PHE14_5
Order: Caulobacterales (78.13%)
32 29521 bp 69.85 13.86 95.00
cn_combo_scaffold_3390 PHE14_27
Species: R_Phenylobacterium_70_10 (53.13%)
32 26109 bp 69.71 13.96 90.90
cn_combo_scaffold_1755 PHE14_4
Order: Caulobacterales (70.97%)
31 30447 bp 70.28 14.83 91.53
cn_combo_scaffold_2136 PHE14_8
Order: Caulobacterales (86.67%)
30 28047 bp 70.36 14.39 92.08
cn_combo_scaffold_2165 PHE14_9
Order: Caulobacterales (68.97%)
29 25241 bp 69.17 14.42 88.86
cn_combo_scaffold_3519 PHE14_29
Species: Phenylobacterium zucineum (58.62%)
29 29261 bp 68.01 13.86 95.25
cn_combo_scaffold_1690 PHE14_3
Order: Caulobacterales (92.86%)
28 32853 bp 69.42 14.54 93.03
cn_combo_scaffold_2013 PHE14_6
Species: Phenylobacterium zucineum (50%)
28 27148 bp 69.91 14.82 90.71
cn_combo_scaffold_4167 PHE14_37
Order: Caulobacterales (78.57%)
28 25115 bp 69.56 14.92 91.25
cn_combo_scaffold_3681 PHE14_32
Order: Caulobacterales (85.19%)
27 25969 bp 69.94 13.94 94.35
cn_combo_scaffold_3313 PHE14_26
Order: Caulobacterales (84.62%)
26 28945 bp 70.14 14.47 89.94
cn_combo_scaffold_4477 PHE14_44
Order: Caulobacterales (76%)
25 19388 bp 70.21 14.18 90.09
cn_combo_scaffold_2304 PHE14_11
Order: Caulobacterales (95.83%)
24 23711 bp 69.70 15.31 94.60
cn_combo_scaffold_2531 PHE14_16
Order: Caulobacterales (79.17%)
24 21928 bp 69.85 13.73 93.15
cn_combo_scaffold_2872 PHE14_22
Order: Caulobacterales (87.5%)
24 22027 bp 69.41 13.85 91.20
cn_combo_scaffold_4222 PHE14_39
Order: Caulobacterales (91.67%)
24 23513 bp 70.67 15.02 93.13
cn_combo_scaffold_2638 PHE14_18
Order: Caulobacterales (100%)
23 23042 bp 69.95 14.52 89.47
cn_combo_scaffold_6333 PHE14_93
Order: Caulobacterales (95.65%)
23 17939 bp 68.73 14.28 90.45
cn_combo_scaffold_2328 PHE14_12
Order: Caulobacterales (77.27%)
22 25243 bp 71.10 14.89 94.98
cn_combo_scaffold_2461 PHE14_14
Order: Caulobacterales (90.91%)
22 22403 bp 69.90 13.92 93.91
cn_combo_scaffold_8802 PHE14_139
Order: Caulobacterales (80.95%)
21 17566 bp 68.59 13.40 92.48
cn_combo_scaffold_2727 PHE14_20
Genus: Caulobacter (50%)
20 20527 bp 68.97 13.90 92.13
cn_combo_scaffold_3156 PHE14_24
Order: Caulobacterales (80%)
20 18085 bp 69.91 14.10 95.79
cn_combo_scaffold_3874 PHE14_34
Order: Caulobacterales (85%)
20 17335 bp 70.15 14.32 92.17
cn_combo_scaffold_4670 PHE14_53
Order: Caulobacterales (80%)
20 19838 bp 69.65 14.80 92.19
cn_combo_scaffold_5815 PHE14_74
Order: Caulobacterales (60%)
20 20395 bp 69.33 14.72 88.08
cn_combo_scaffold_6282 PHE14_90
Order: Caulobacterales (100%)
20 9601 bp 65.90 15.31 94.43
cn_combo_scaffold_2724 PHE14_19
Class: Alphaproteobacteria (89.47%)
19 20568 bp 69.78 14.62 91.47
cn_combo_scaffold_2859 PHE14_21
Order: Caulobacterales (78.95%)
19 19744 bp 70.12 14.14 93.40
cn_combo_scaffold_3110 PHE14_23
Order: Caulobacterales (100%)
19 18322 bp 70.29 14.17 91.97
cn_combo_scaffold_3423 PHE14_28
Order: Caulobacterales (89.47%)
19 16824 bp 69.38 14.60 90.80
cn_combo_scaffold_3546 PHE14_30
Order: Caulobacterales (57.89%)
19 16209 bp 70.54 13.62 91.21
cn_combo_scaffold_4576 PHE14_46
Order: Caulobacterales (52.63%)
19 12863 bp 67.08 12.67 88.49
cn_combo_scaffold_3151 PHE14_231
Class: Alphaproteobacteria (88.89%)
18 18107 bp 69.55 15.16 91.39
cn_combo_scaffold_2284 PHE14_10
Order: Caulobacterales (83.33%)
18 23880 bp 68.45 13.52 95.04
cn_combo_scaffold_2409 PHE14_13
Genus: Caulobacter (50%)
18 22843 bp 68.14 13.50 94.14
cn_combo_scaffold_2515 PHE14_15
Order: Caulobacterales (88.89%)
18 22006 bp 69.04 14.10 91.52
cn_combo_scaffold_4592 PHE14_48
Order: Caulobacterales (100%)
18 13938 bp 69.90 14.45 90.98
cn_combo_scaffold_6142 PHE14_87
Order: Caulobacterales (61.11%)
18 14442 bp 63.58 10.25 67.66
cn_combo_scaffold_2644 PHE14_17
Order: Caulobacterales (82.35%)
17 21147 bp 68.16 14.03 90.44
cn_combo_scaffold_3734 PHE14_33
Order: Caulobacterales (94.12%)
17 15468 bp 68.48 13.37 92.13
cn_combo_scaffold_4244 PHE14_40
Order: Caulobacterales (100%)
17 13795 bp 70.15 15.06 88.31
cn_combo_scaffold_4465 PHE14_43
Order: Caulobacterales (88.24%)
17 13150 bp 69.25 14.76 94.27
cn_combo_scaffold_4597 PHE14_47
Order: Caulobacterales (52.94%)
17 13208 bp 66.70 11.35 90.38
cn_combo_scaffold_4806 PHE14_54
Order: Caulobacterales (76.47%)
17 17690 bp 68.52 14.07 88.38
cn_combo_scaffold_9819 PHE14_162
Order: Caulobacterales (100%)
16 12294 bp 69.61 13.85 95.39
cn_combo_scaffold_4183 PHE14_36
Species: R_Phenylobacterium_70_10 (50%)
16 13984 bp 70.22 14.25 88.34
Displaying items 1-50 of 245 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.