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cn_combo_scaffold_43

Alias: PHE30_1

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Displaying items 61-90 of 196 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_43_61
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83113..83826
DNA (714bp) protein (238aa)
transcriptional regulator n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6B27A
winged helix family two component transcriptional regulator
Winged helix family two component transcriptional regulator {ECO:0000313|EMBL:AJA07022.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sp
cn_combo_scaffold_43_62
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83823..85133
DNA (1311bp) protein (437aa)
FecR family protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0EMY1_CAUCE
FecR family protein {ECO:0000313|EMBL:ENZ83204.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentu
peptidoglycan binding domain/FecR protein
cn_combo_scaffold_43_63
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85087..87477
DNA (2391bp) protein (797aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae
Multi-sensor signal transduction histidine kinase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RY07_9SPHN
multi-sensor signal transduction histidine kinase
cn_combo_scaffold_43_64
unknown

Not on your lists

comp(87451..87939)
DNA (489bp) protein (163aa)

This feature has no annotations

cn_combo_scaffold_43_65
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87936..88766)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U2D7_ALIDB
Uncharacterized protein {ECO:0000313|EMBL:ADV02148.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
hypothetical protein
cn_combo_scaffold_43_66
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89277..90626)
DNA (1350bp) protein (450aa)
Glutamate dehydrogenase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R8T2_PHEZH
gdhA; glutamate dehydrogenase
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobact
cn_combo_scaffold_43_67
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90777..92636)
DNA (1860bp) protein (620aa)
ADP-ribosylation/Crystallin J1; K05521 ADP-ribosylglycohydrolase [EC:3.2.-.-] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
ADP-ribosylation/Crystallin J1 n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RMS8_ALLVD
ADP-ribosylation/Crystallin J1
cn_combo_scaffold_43_68
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92726..93367
DNA (642bp) protein (214aa)
ADP-ribose pyrophosphatase n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0H047_9GAMM
ADP-ribose pyrophosphatase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
ADP-ribose pyrophosphatase
cn_combo_scaffold_43_69
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93393..94262)
DNA (870bp) protein (290aa)
Transcriptional regulator, AraC family n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SV81_CAUSK
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABZ72971.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Cau
cn_combo_scaffold_43_70
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94448..95581
DNA (1134bp) protein (378aa)
4-hydroxybenzoate 3-monooxygenase (EC:1.14.13.2)
4-hydroxybenzoate 3-monooxygenase {ECO:0000313|EMBL:ADG10807.1}; EC=1.14.13.2 {ECO:0000313|EMBL:ADG10807.1};; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caul
4-hydroxybenzoate 3-monooxygenase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VDG7_CAUST
cn_combo_scaffold_43_71
Grimontia indica, Grimontia, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95588..96529
DNA (942bp) protein (314aa)
4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase n=1 Tax=Grimontia sp. AK16 RepID=R1GM51_9GAMM
4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase {ECO:0000313|EMBL:EOD77253.1}; TaxID=1056512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Grimontia.;" so
4-carboxy-2-hydroxymuconate-6-semialdehydedehydrogenase
cn_combo_scaffold_43_72
gamma proteobacterium BDW918, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96539..97225
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium BDW918 RepID=I2JIE6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIF42748.1}; TaxID=1168065 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium BDW918.;"
dimethylmenaquinone methyltransferase
cn_combo_scaffold_43_73
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97222..98307
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4PZL9_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ91020.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis b
4-oxalomesaconate tautomerase
cn_combo_scaffold_43_74
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98304..99185
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4PRT2_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:KJV10525.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
phosphogluconate dehydrogenase, nad-binding, putative-like protein
cn_combo_scaffold_43_75
gamma proteobacterium BDW918, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99182..100204
DNA (1023bp) protein (341aa)
4-oxalomesaconate hydratase n=1 Tax=Roseomonas sp. B5 RepID=UPI000303E635
Amidohydrolase 2 {ECO:0000313|EMBL:EIF42751.1}; TaxID=1168065 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium BDW918.;"
ligJ; 4-oxalomesaconate hydratase
cn_combo_scaffold_43_76
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

100201..101109
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4RI65_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ91023.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis b
amidohydrolase 2
cn_combo_scaffold_43_77
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101106..101492
DNA (387bp) protein (129aa)
protocatechuate 4,5-dioxygenase subunit alpha; K04100 protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Protocatechuate 4,5-dioxygenase alpha chain (EC:1.13.11.8)
Protocatechuate 4,5-dioxygenase, alpha subunit n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y4Z4_LEPCP
cn_combo_scaffold_43_78
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101492..102331
DNA (840bp) protein (280aa)
ligB; Protocatechuate 4,5-dioxygenase, beta chain (EC:1.13.11.8)
Uncharacterized protein n=1 Tax=Sphingobium sp. AP49 RepID=J2WPK1_9SPHN
Protocatechuate 3,4-dioxygenase {ECO:0000313|EMBL:KJS37833.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae ba
cn_combo_scaffold_43_79
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102424..103059
DNA (636bp) protein (212aa)
Glutathione S-transferase {ECO:0000313|EMBL:CBS90854.1}; EC=2.5.1.18 {ECO:0000313|EMBL:CBS90854.1};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirill
Glutathione S-transferase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZHA9_AZOL4
gst3; glutathione S-transferase
cn_combo_scaffold_43_80
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103287..105752
DNA (2466bp) protein (822aa)
TonB-dependent receptor n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RE01_PHEZH
TonB-dependent receptor Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
TonB-dependent receptor
cn_combo_scaffold_43_81
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105825..106934)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RE04_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG78437.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
cn_combo_scaffold_43_82
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(106966..107292)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RE05_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG78438.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
cn_combo_scaffold_43_83
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(107493..107804)
DNA (312bp) protein (104aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
cn_combo_scaffold_43_84
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107885..109189
DNA (1305bp) protein (435aa)
ABC transporter, permease protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RE06_PHEZH
ABC transporter permease; K02066 putative ABC transport system permease protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
ABC transporter permease
cn_combo_scaffold_43_85
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109186..110025
DNA (840bp) protein (280aa)
ABC transporter, ATP-binding protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RE07_PHEZH
ABC transporter ATP-binding protein; K02065 putative ABC transport system ATP-binding protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
ABC transporter ATP-binding protein
cn_combo_scaffold_43_86
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

110025..110987
DNA (963bp) protein (321aa)
ABC transporter, periplasmic substrate-binding protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RE08_PHEZH
ABC transporter substrate-binding protein; K02067 putative ABC transport system substrate-binding protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
ABC transporter substrate-binding protein
cn_combo_scaffold_43_87
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

110984..111637
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RE09_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_43_88
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(111647..112537)
DNA (891bp) protein (297aa)
Bifunctional protein FolD {ECO:0000255|HAMAP-Rule:MF_01576}; Includes:; Methylenetetrahydrofolate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01576}; EC=1.5.1.5 {ECO:0000255|HAMAP-Rule:MF_01576};; Includ
Bifunctional protein FolD n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=FOLD_PHEZH
folD; FolD bifunctional protein
cn_combo_scaffold_43_89
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112534..113016)
DNA (483bp) protein (161aa)
MutT/nudix family protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RE12_PHEZH
MutT/nudix family protein
MutT/nudix family protein {ECO:0000313|EMBL:ACG78445.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobact
cn_combo_scaffold_43_90
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(113016..114023)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RE13_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
Displaying items 61-90 of 196 in total

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