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cn_combo_scaffold_43

Alias: PHE30_1

Search features with annotation key words

Displaying items 151-180 of 196 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_43_150
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(174490..175608)
DNA (1119bp) protein (373aa)
Oxidoreductase domain protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T1W9_CAUSK
oxidoreductase domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
oxidoreductase domain-containing protein
cn_combo_scaffold_43_151
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(175635..176618)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REP1_PHEZH
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACG78567.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
cn_combo_scaffold_43_152
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(176650..177867)
DNA (1218bp) protein (406aa)
Sugar phosphate permease n=1 Tax=Caulobacter sp. AP07 RepID=J2H3D1_9CAUL
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_43_153
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

178048..179055
DNA (1008bp) protein (336aa)
Transcriptional regulator, LacI family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REP3_PHEZH
transcriptional regulator, LacI family
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACG78569.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source
cn_combo_scaffold_43_154
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

179106..180401
DNA (1296bp) protein (432aa)
O-acetylhomoserine/O-acetylserine sulfhydrylase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCQ5_PHEZH
O-acetylhomoserine/O-acetylserine sulfhydrylase
O-acetylhomoserine/O-acetylserine sulfhydrylase {ECO:0000313|EMBL:ACG78242.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.
cn_combo_scaffold_43_155
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180406..182211)
DNA (1806bp) protein (602aa)
PAS domain S-box n=1 Tax=Rhizobium sp. CF080 RepID=J3BQ67_9RHIZ
Putative two-component sensor histidine kinase with PAS/PAC domains rbh
Putative two-component sensor histidine kinase with PAS/PAC domains {ECO:0000313|EMBL:CDN49931.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobiu
cn_combo_scaffold_43_156
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(182308..184383)
DNA (2076bp) protein (692aa)
integral membrane sensor hybrid histidine kinase (EC:2.7.13.3) Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
integral membrane sensor hybrid histidine kinase (EC:2.7.13.3)
Integral membrane sensor hybrid histidine kinase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SYR2_CAUSK
cn_combo_scaffold_43_157
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(184518..186161)
DNA (1644bp) protein (548aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Desulfovibrio sp. X2 RepID=S7TXX0_9DELT
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:EPR41610.1}; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" sourc
GAF sensor hybrid histidine kinase
cn_combo_scaffold_43_158
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(186301..187902)
DNA (1602bp) protein (534aa)
Major facilitator superfamily MFS_1 n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T7I0_CAUSK
major facilitator transporter rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABZ69718.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulob
cn_combo_scaffold_43_159
Brevundimonas sp. KM4, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(188005..188754)
DNA (750bp) protein (250aa)
3-oxoacyl-ACP reductase n=1 Tax=Sphingomonas elodea RepID=UPI0002630877
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KJV40106.1}; TaxID=1628191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas s
3-oxoacyl-ACP reductase
cn_combo_scaffold_43_160
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(189278..190150)
DNA (873bp) protein (291aa)
Transcriptional regulator, IclR family n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VGC6_CAUST
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ADG10245.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Cau
cn_combo_scaffold_43_161
Dyadobacter beijingensis, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(190454..191470)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037BF658
cn_combo_scaffold_43_162
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(191699..194332)
DNA (2634bp) protein (878aa)
TonB-dependent receptor n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGL8_PHEZH
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
TonB-dependent receptor
cn_combo_scaffold_43_163
unknown

Not on your lists

194406..194519
DNA (114bp) protein (38aa)

This feature has no annotations

cn_combo_scaffold_43_164
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(194628..195932)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0KLG9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB34218.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium umm
major facilitator superfamily protein
cn_combo_scaffold_43_165
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(196025..196492)
DNA (468bp) protein (156aa)
Putative cytochrome c signal peptide protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R819_PHEZH
cytochrome c signal peptide protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
cytochrome c signal peptide protein
cn_combo_scaffold_43_166
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(196497..197315)
DNA (819bp) protein (273aa)
IclR family transcriptional regulator n=1 Tax=Amycolatopsis balhimycina RepID=UPI00037A62F5
IclR family transcriptional regulator
IclR family transcriptional regulator {ECO:0000313|EMBL:AEK38892.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis medit
cn_combo_scaffold_43_167
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(197398..198297)
DNA (900bp) protein (300aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
ureidoglycolate lyase n=1 Tax=Sphingomonas melonis RepID=UPI00036FA084
Sphingomonas taxi strain 30a NODE_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30240.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
cn_combo_scaffold_43_168
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(198424..199587)
DNA (1164bp) protein (388aa)
lldD; L-lactate dehydrogenase (EC:1.1.2.3)
FMN-dependent dehydrogenase family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WX72_9SPHN
LldD protein {ECO:0000313|EMBL:GAN14169.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis
cn_combo_scaffold_43_169
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(199637..201262)
DNA (1626bp) protein (542aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaroma
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI00038195BC
carboxylesterase
cn_combo_scaffold_43_170
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(201304..202968)
DNA (1665bp) protein (555aa)
Ankyrin 23/unc44-like protein n=1 Tax=uncultured bacterium 70 RepID=E3T6J4_9BACT
ankyrin Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
hypothetical protein
cn_combo_scaffold_43_171
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(202971..204269)
DNA (1299bp) protein (433aa)
Secreted protein containing DUF1552 n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5T942_9PLAN
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
signal peptide
cn_combo_scaffold_43_172
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(204266..206791)
DNA (2526bp) protein (842aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026P8_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ83021.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
cn_combo_scaffold_43_173
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(206935..208947)
DNA (2013bp) protein (671aa)
quinoprotein glucose dehydrogenase (EC:1.1.5.2); K00117 quinoprotein glucose dehydrogenase [EC:1.1.5.2] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
quinoprotein glucose dehydrogenase (EC:1.1.5.2)
quinoprotein glucose dehydrogenase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B58636
cn_combo_scaffold_43_174
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(208987..210333)
DNA (1347bp) protein (449aa)
Putative amidohydrolase n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z7I3_SPHJU
putative amidohydrolase
Putative amidohydrolase {ECO:0000313|EMBL:BAI98452.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japo
cn_combo_scaffold_43_175
unknown

Not on your lists

comp(210346..210747)
DNA (402bp) protein (134aa)

This feature has no annotations

cn_combo_scaffold_43_176
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

211524..212336
DNA (813bp) protein (271aa)
Surface antigen family protein,SH3 domain-containing protein n=1 Tax=Caulobacter sp. AP07 RepID=J3A5B7_9CAUL
SH3 domain-containing cell surface protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
17 kDa surface antigen
cn_combo_scaffold_43_177
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(212439..215585)
DNA (3147bp) protein (1049aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GW95_SPHAL
TPR repeat-containing protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_43_178
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(215582..218302)
DNA (2721bp) protein (907aa)
Putative exported haemagglutinin-like protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZFT0_AZOL4
filamentous hemagglutinin outer membrane protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_43_179
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(218302..219855)
DNA (1554bp) protein (518aa)
Hemolysin activation/secretion protein n=1 Tax=Caulobacter sp. AP07 RepID=J2PZL3_9CAUL
putative hemolysin activation/secretion protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hemolysin activation/secretion protein-like protein
Displaying items 151-180 of 196 in total

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