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cn_combo_scaffold_293

Alias: PHE30_9

Search features with annotation key words

Displaying items 61-90 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_293_61
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61502..61981)
DNA (480bp) protein (160aa)
purE; phosphoribosylaminoimidazole carboxylase catalytic subunit; K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RB51_PHEZH
purE; phosphoribosylaminoimidazole carboxylase catalytic subunit
cn_combo_scaffold_293_62
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62141..62863
DNA (723bp) protein (241aa)
Two-component response regulator n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H4N5_CAUCN
two-component response regulator Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
dgcA; GGDEF diguanylate cyclase DgcA
cn_combo_scaffold_293_63
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62895..63344)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RB79_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_293_64
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63489..64895)
DNA (1407bp) protein (469aa)
Glycosyltransferase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RB75_PHEZH
glycosyltransferase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
glycosyltransferase rbh
cn_combo_scaffold_293_65
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65107..65745
DNA (639bp) protein (213aa)
Transcriptional regulator, TetR family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RB73_PHEZH
transcriptional regulator, TetR family Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
transcriptional regulator, TetR family
cn_combo_scaffold_293_66
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65781..66284)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBG3_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_293_67
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66281..67441)
DNA (1161bp) protein (387aa)
MltA domain-containing protein; K08304 membrane-bound lytic murein transglycosylase A [EC:3.2.1.-] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
membrane-bound lytic murein transglycosylase A (EC:3.2.1.-)
transglycosylase n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI0003789FCF
cn_combo_scaffold_293_68
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67447..68064)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBG1_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG76421.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
cn_combo_scaffold_293_69
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68247..68732
DNA (486bp) protein (162aa)
Protein-export protein SecB n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=SECB_PHEZH
secB; protein-export protein SecB; K03071 preprotein translocase subunit SecB Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
secB; protein-export protein SecB
cn_combo_scaffold_293_70
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68775..69251)
DNA (477bp) protein (159aa)
Universal stress protein UspA n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC75_PHEZH
universal stress protein UspA Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
universal stress protein UspA
cn_combo_scaffold_293_71
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69297..70349)
DNA (1053bp) protein (351aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
Tryptophan--tRNA ligase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC76_PHEZH
trpS; tryptophanyl-tRNA synthetase
cn_combo_scaffold_293_72
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70475..72139)
DNA (1665bp) protein (555aa)
Virulence factor MviN-like protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC77_PHEZH
virulence factor MviN-like protein rbh
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phe
cn_combo_scaffold_293_73
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72259..72918
DNA (660bp) protein (220aa)
Uncharacterized protein n=4 Tax=Xanthomonas oryzae RepID=Q5GW66_XANOR
Uncharacterized protein {ECO:0000313|EMBL:KHK91675.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
cn_combo_scaffold_293_74
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72932..73597)
DNA (666bp) protein (222aa)
Predicted enzyme with a TIM-barrel fold n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCZ0_PHEZH
hypothetical protein
Predicted enzyme with a TIM-barrel fold {ECO:0000313|EMBL:ACG79922.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" sourc
cn_combo_scaffold_293_75
unknown

Not on your lists

comp(73635..73910)
DNA (276bp) protein (92aa)

This feature has no annotations

cn_combo_scaffold_293_76
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74188..74574)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCZ2_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_293_77
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74847..75317
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCZ3_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_293_78
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


75491..78103
DNA (2613bp) protein (871aa)
leuS; leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Leucine--tRNA ligase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=SYL_PHEZH
leuS; leucyl-tRNA synthetase
cn_combo_scaffold_293_79
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78100..78609
DNA (510bp) protein (170aa)
Predicted secreted (Periplasmic) protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCZ5_PHEZH
secreted (periplasmic) protein
Predicted secreted (Periplasmic) protein {ECO:0000313|EMBL:ACG79927.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" sour
cn_combo_scaffold_293_80
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78610..79662
DNA (1053bp) protein (351aa)
holA; DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta [EC:2.7.7.7] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Putative DNA polymerase III, delta subunit n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCZ6_PHEZH
holA; DNA polymerase III subunit delta
cn_combo_scaffold_293_81
Hyphomonas oceanitis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79808..81955
DNA (2148bp) protein (716aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0ILI1_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:KDA00903.1}; TaxID=1280953 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas oceaniti
TonB-dependent receptor
cn_combo_scaffold_293_82
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82053..83735
DNA (1683bp) protein (561aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense
Carboxylesterase type B n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y2Y4_9PROT
carboxylesterase type B
cn_combo_scaffold_293_83
unknown

Not on your lists

83693..84820
DNA (1128bp) protein (376aa)

This feature has no annotations

cn_combo_scaffold_293_84
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84832..85791)
DNA (960bp) protein (320aa)
Transcriptional regulator, LysR family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC31_PHEZH
transcriptional regulator, LysR family Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
transcriptional regulator, LysR family rbh
cn_combo_scaffold_293_85
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85992..88799
DNA (2808bp) protein (936aa)
peptidase, M16 family; K07263 zinc protease [EC:3.4.24.-] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Peptidase, M16 family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC32_PHEZH
peptidase, M16 family
cn_combo_scaffold_293_86
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88786..89145)
DNA (360bp) protein (120aa)
Uncharacterized protein (Fragment) n=1 Tax=Emiliania huxleyi CCMP1516 RepID=R1DBS1_EMIHU
SL44-1; basic proline-rich protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_293_87
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89663..90967)
DNA (1305bp) protein (435aa)
Heat shock protein Hsp70 n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC33_PHEZH
molecular chaperone DnaK; K04046 hypothetical chaperone protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
molecular chaperone DnaK
cn_combo_scaffold_293_88
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91035..91445)
DNA (411bp) protein (137aa)
GreA/GreB family elongation factor n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T7C4_CAUSK
GreA/GreB family elongation factor; K06140 regulator of nucleoside diphosphate kinase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
GreA/GreB family elongation factor
cn_combo_scaffold_293_89

Not on your lists

comp(91841..92581)
DNA (741bp) protein (247aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS33345.1}; TaxID=1618927 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_42_13.;"
hypothetical protein OsccyDRAFT_3502 id=4043445 bin=GWC2_Deltaproteobacteria_56_8 species=Oscillatoriales cyanobacterium JSC-12 genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
hypothetical protein
cn_combo_scaffold_293_90
unknown

Not on your lists

comp(92562..92870)
DNA (309bp) protein (103aa)

This feature has no annotations

Displaying items 61-90 of 107 in total

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