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cn_combo_scaffold_280

Alias: PHE30_11

Search features with annotation key words

Displaying items 31-60 of 181 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_280_30
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29384..30169
DNA (786bp) protein (262aa)
fecE; iron(III) dicitrate transport ATP-binding protein fecE; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
fecE; iron(III) dicitrate transport ATP-binding protein fecE; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] id=12496185 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ABC transporter
cn_combo_scaffold_280_31
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30184..31014)
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WYR1_9SPHN
DNA, contig: SP607 {ECO:0000313|EMBL:GAN12346.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
hypothetical protein
cn_combo_scaffold_280_trna_3
unknown

Not on your lists

comp(31500..31571)
DNA (72bp)
transferRNA
cn_combo_scaffold_280_32
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31591..32307)
DNA (717bp) protein (239aa)
gph; phosphoglycolate phosphatase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Phosphoglycolate phosphatase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDL2_PHEZH
gph; phosphoglycolate phosphatase
cn_combo_scaffold_280_33
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32415..33770
DNA (1356bp) protein (452aa)
Bifunctional protein GlmU n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDL1_PHEZH
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase rbh
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phen
cn_combo_scaffold_280_34
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33713..34453
DNA (741bp) protein (247aa)
rpiA; ribose-5-phosphate isomerase A; K01807 ribose 5-phosphate isomerase A [EC:5.3.1.6] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Ribose-5-phosphate isomerase A n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDL0_PHEZH
rpiA; ribose-5-phosphate isomerase A
cn_combo_scaffold_280_35
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34465..35850
DNA (1386bp) protein (462aa)
gor; glutathione reductase; K00383 glutathione reductase (NADPH) [EC:1.8.1.7] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Glutathione reductase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDK9_PHEZH
gor; glutathione reductase
cn_combo_scaffold_280_36
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35868..37073
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDK8_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_280_37
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37192..38571
DNA (1380bp) protein (460aa)
dhs; phospho-2-dehydro-3-deoxyheptonate aldolase; K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Phospho-2-dehydro-3-deoxyheptonate aldolase, class II n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDK7_PHEZH
dhs; phospho-2-dehydro-3-deoxyheptonate aldolase
cn_combo_scaffold_280_38
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38709..40079
DNA (1371bp) protein (457aa)
MATE efflux family protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDK6_PHEZH
MATE efflux family protein rbh
MATE efflux family protein {ECO:0000313|EMBL:ACG78396.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobac
cn_combo_scaffold_280_39
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40093..40620)
DNA (528bp) protein (176aa)
Probable transcriptional regulator n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98I65_RHILO
transcriptional regulator
Probable transcriptional regulator {ECO:0000313|EMBL:BAB49651.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobi
cn_combo_scaffold_280_40
Cylindrospermum stagnale, Cylindrospermum, Nostocales, Cyanobacteria, Bacteria

Not on your lists

40795..41466
DNA (672bp) protein (224aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9WX20_9NOST
methylase involved in ubiquinone/menaquinone biosynthesis
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AFZ24364.1}; TaxID=56107 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Cylindrospermum.;" source="Cylindrosperm
cn_combo_scaffold_280_41
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41489..42391)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDK5_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_280_42
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42649..43629)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RB26_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_280_43
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43743..44192
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RB25_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_280_44
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44437..46566
DNA (2130bp) protein (710aa)
hppA; membrane-bound proton-translocating pyrophosphatase; K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RB24_PHEZH
hppA; membrane-bound proton-translocating pyrophosphatase
cn_combo_scaffold_280_45
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46680..47186)
DNA (507bp) protein (169aa)
Small protein A (TmRNA-binding) n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RB23_PHEZH
small protein A (tmRNA-binding) Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
small protein A (tmRNA-binding)
cn_combo_scaffold_280_46
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47314..47841
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RB22_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_280_47
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47826..48353
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RB21_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_280_48
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48379..49494
DNA (1116bp) protein (372aa)
Phosphate acyltransferase {ECO:0000255|HAMAP-Rule:MF_00019}; EC=2.3.1.n2 {ECO:0000255|HAMAP-Rule:MF_00019};; Acyl-ACP phosphotransacylase {ECO:0000255|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]
Phosphate acyltransferase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=PLSX_PHEZH
plsX; glycerol-3-phosphate acyltransferase PlsX
cn_combo_scaffold_280_49
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49481..50476
DNA (996bp) protein (332aa)
fabH; 3-oxoacyl-ACP synthase; K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RB19_PHEZH
fabH; 3-oxoacyl-ACP synthase
cn_combo_scaffold_280_50
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50543..50878
DNA (336bp) protein (112aa)
Integration host factor subunit alpha n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=IHFA_PHEZH
ihfA; integration host factor subunit alpha; K04764 integration host factor subunit alpha Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
ihfA; integration host factor subunit alpha
cn_combo_scaffold_280_51
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50895..51305
DNA (411bp) protein (137aa)
Transcriptional regulator, putative MerR family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RB17_PHEZH
transcriptional regulator, MerR family
Transcriptional regulator, putative MerR family {ECO:0000313|EMBL:ACG78068.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.
cn_combo_scaffold_280_52
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(51516..52208)
DNA (693bp) protein (231aa)
FG-GAP repeat protein id=2063530 bin=GWE2_Bacteroidetes_42_42 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
PKD domain-containing protein
Tax=BJP_08E140C01_Bacteriodales_41_10
cn_combo_scaffold_280_trna_2
unknown

Not on your lists

comp(52533..52606)
DNA (74bp)
transferRNA
cn_combo_scaffold_280_53
unknown

Not on your lists

52647..53351
DNA (705bp) protein (235aa)

This feature has no annotations

cn_combo_scaffold_280_54
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53371..53583)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T0S8_CAUSK
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_280_55
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53674..54705
DNA (1032bp) protein (344aa)
Heme A synthase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RB14_PHEZH
cytochrome c oxidase assembly protein; K02259 cytochrome c oxidase assembly protein subunit 15 Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
cytochrome c oxidase assembly protein
cn_combo_scaffold_280_56
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


54883..55359
DNA (477bp) protein (159aa)
50S ribosomal protein L13 n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RB13_PHEZH
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
rplM; 50S ribosomal protein L13
cn_combo_scaffold_280_57
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


55359..55847
DNA (489bp) protein (163aa)
30S ribosomal protein S9 n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RB12_PHEZH
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
rpsI; 30S ribosomal protein S9
Displaying items 31-60 of 181 in total

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