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cn_combo_scaffold_401_23

Organism: CN-SCN_Phenylobacterium_31x

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 10 / 38
Location: comp(22189..22761)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Caulobacter sp. AP07 RepID=J2HKQ3_9CAUL similarity UNIREF
DB: UNIREF100
  • Identity: 52.3
  • Coverage: 172.0
  • Bit_score: 170
  • Evalue 2.30e-39
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EJL36318.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 51.7
  • Coverage: 172.0
  • Bit_score: 168
  • Evalue 9.40e-39
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 190.0
  • Bit_score: 164
  • Evalue 3.60e-38

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Taxonomy

Caulobacter sp. AP07 → Caulobacter → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
GTGTCTGACCGCGCCGCGCGCATCGCCTGGTTCAAGGCTGGCGTGCTGCCGCATGAGGCCAGTCTGCGGCGGTTTTTGCGGCGCACGGGCGCGCCCGACATGGACCTGGACGACCTGGTGTCCGAGGCCCTGACGCGGACCTACGCCGCCGAGGACTGGCGGCGGATCACCAACGGCCGCAGCTATCTTTTCACCATCGCCCGCAATCTCGTGTTCGACGCAGCGCGGCGACAAAAGATCGTGGCCTTCGAGACCGTGGCCGACCTCGACGCCCTCGGGCTTGTGGACGCCCAGCCGTCGGCGGAAGCCGTCCTGACAACCCGCGACGAACTGCGGGTCCTCCAGGCGGCCGTAGATCGGCTGCCGCCGCGCGCGCGGGAGGTGTTCCTGCTGCGACGGGTGGAAAATCTTTCACAGCGCCAGGTCGGGGAACGGCTCAACTTATCCGTTTCTACGGTAGAAGGGCATTTCACGAAGGCGATCGCGGCCCTTACGAAGGCCCTGCAAGACAGCGACCCGATCAGGAGCGGAGACGCGGGACCAGCATGGAGAAGCCAGCGGCAGAAGCGTTGA
PROTEIN sequence
Length: 191
VSDRAARIAWFKAGVLPHEASLRRFLRRTGAPDMDLDDLVSEALTRTYAAEDWRRITNGRSYLFTIARNLVFDAARRQKIVAFETVADLDALGLVDAQPSAEAVLTTRDELRVLQAAVDRLPPRAREVFLLRRVENLSQRQVGERLNLSVSTVEGHFTKAIAALTKALQDSDPIRSGDAGPAWRSQRQKR*