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cn_combo_scaffold_2444

Alias: RUB134_38

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2444_1
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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95..526
DNA (432bp) protein (144aa)
Biopolymer transport protein TolR n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HW61_RUBGI
tolR; biopolymer transport protein TolR
Biopolymer transport protein TolR {ECO:0000313|EMBL:BAL97248.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (stra
cn_combo_scaffold_2444_2
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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530..1447
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000362F66C
TonB-like protein {ECO:0000313|EMBL:EGJ10010.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35
TolA-related transport transmembrane protein
cn_combo_scaffold_2444_3
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1473..2468)
DNA (996bp) protein (332aa)
ABC transporter ATP-binding protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00035DBE62
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHR70014.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiale
ABC-type oligopeptide transport system, ATPase component
cn_combo_scaffold_2444_4
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2465..3445)
DNA (981bp) protein (327aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00035ED608
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHR70013.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiale
oligopeptide/dipeptide ABC transporter ATPase
cn_combo_scaffold_2444_5
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3450..4397)
DNA (948bp) protein (316aa)
IM pore protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LKM5_9BURK
IM pore protein {ECO:0000313|EMBL:EGJ08893.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;
ABC transporter permease
cn_combo_scaffold_2444_6
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4410..5387)
DNA (978bp) protein (326aa)
IM pore protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LKM6_9BURK
IM pore protein {ECO:0000313|EMBL:EGJ08894.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;
ABC transporter permease
cn_combo_scaffold_2444_7
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5565..7136
DNA (1572bp) protein (524aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIH8_9BURK
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EHR71798.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" sour
ABC transporter substrate-binding protein
cn_combo_scaffold_2444_8
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7225..8553)
DNA (1329bp) protein (443aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RIJ2_ACCPU
integral membrane sensor signal transduction histidine kinase
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:ACV36566.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulib
cn_combo_scaffold_2444_9
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8550..9221)
DNA (672bp) protein (224aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y006_LEPCP
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACB34133.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="L
cn_combo_scaffold_2444_10
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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9278..11020
DNA (1743bp) protein (581aa)
Phosphoethanolamine transferase EptA {ECO:0000313|EMBL:EXI68022.1}; EC=2.7.-.- {ECO:0000313|EMBL:EXI68022.1};; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulib
Sulfatase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y005_LEPCP
sulfatase rbh
cn_combo_scaffold_2444_11
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11017..11721
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HW65_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL97252.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 10
cn_combo_scaffold_2444_12
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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11928..14003
DNA (2076bp) protein (692aa)
Twitching motility protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CSM9_TRURR
twitching motility protein
Twitching motility protein {ECO:0000313|EMBL:ADI15449.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strai
cn_combo_scaffold_2444_13
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14127..17738)
DNA (3612bp) protein (1204aa)
5-oxoprolinase (EC:3.5.2.9) rbh
N-methylhydantoinase B/acetone carboxylase, alpha subunit n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRQ7_9BURK
N-methylhydantoinase B/acetone carboxylase, alpha subunit {ECO:0000313|EMBL:EHR72837.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales
cn_combo_scaffold_2444_14
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

18010..18693
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2IZ25_NOSP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACC83132.1}; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctiforme (strain ATCC 29133 / PCC 73102).;"
cn_combo_scaffold_2444_15
Planktothrix agardhii, Planktothrix, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(18697..19800)
DNA (1104bp) protein (368aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=388467 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Planktothrix.;" s
DNA methylase N-4/N-6 domain-containing protein (EC:2.1.1.72)
DNA methyltransferase n=1 Tax=Anabaena sp. PCC 7108 RepID=UPI000381D49C
cn_combo_scaffold_2444_16
unknown

Not on your lists

comp(19942..20151)
DNA (210bp) protein (70aa)

This feature has no annotations

cn_combo_scaffold_2444_17
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(20203..20367)
DNA (165bp) protein (55aa)
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
cn_combo_scaffold_2444_18
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20564..21025)
DNA (462bp) protein (154aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
Putative uncharacterized protein id=4831384 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
hypothetical protein
cn_combo_scaffold_2444_19
unknown

Not on your lists

21175..21687
DNA (513bp) protein (171aa)

This feature has no annotations

cn_combo_scaffold_2444_20
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22257..22493
DNA (237bp) protein (79aa)
integrase n=1 Tax=Burkholderia bryophila RepID=UPI0003658D86
tyrosine recombinase
Site-specific recombinase XerD {ECO:0000313|EMBL:EJN02825.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspi
Displaying 20 items

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