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cn_combo_scaffold_30

Alias: RUB134_1

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Displaying items 31-60 of 320 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_30_31
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33261..34280
DNA (1020bp) protein (340aa)
Trap dicarboxylate transporter-dctp subunit n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CBQ4_9RHOB
extracellular solute-binding protein Tax=CG_Rhodocyc_01
extracellular solute-binding protein
cn_combo_scaffold_30_32
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34319..34903
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RQ80_9RHIZ
putative TRAP-type C4-dicarboxylate transport system, small permease component Tax=CG_Rhodocyc_01
dctQ; TRAP dicarboxylate transporter subunit DctQ
cn_combo_scaffold_30_33
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34900..36192
DNA (1293bp) protein (431aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F0CE07
C4-dicarboxylate transport system, large permease Tax=CG_Rhodocyc_01
hypothetical protein rbh
cn_combo_scaffold_30_34
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36224..39784
DNA (3561bp) protein (1187aa)
MFS transporter n=1 Tax=Burkholderia sp. JPY347 RepID=UPI00037CB394
ifoAB_iorAB; indolepyruvate ferredoxin oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
ifoAB_iorAB; indolepyruvate ferredoxin oxidoreductase
cn_combo_scaffold_30_35
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39792..41438
DNA (1647bp) protein (549aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5Y8_AROAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI07273.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (
cn_combo_scaffold_30_36
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41441..42076
DNA (636bp) protein (212aa)
Transmembrane protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFE0_METPP
transmembrane protein
Putative membrane protein {ECO:0000313|EMBL:EWS58260.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
cn_combo_scaffold_30_37
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42076..43785
DNA (1710bp) protein (570aa)
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabA/FabZ n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CLN9_VARPS
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabA/FabZ {ECO:0000313|EMBL:ACS19296.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variov
cn_combo_scaffold_30_38
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43808..44782
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFE3_METPP
hypothetical protein
Lipid A biosynthesis lauroyl acyltransferase {ECO:0000313|EMBL:EWS58263.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp.
cn_combo_scaffold_30_39
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44769..45383
DNA (615bp) protein (205aa)
Outer membrane lipoprotein-sorting protein n=1 Tax=Variovorax sp. CF313 RepID=J2K8X9_9BURK
Outer membrane lipoprotein-sorting protein {ECO:0000313|EMBL:EJL69678.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Vario
hypothetical protein
cn_combo_scaffold_30_40
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45380..47788
DNA (2409bp) protein (803aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFE5_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM94284.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM
cn_combo_scaffold_30_41
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47833..48708
DNA (876bp) protein (292aa)
Polysaccharide deacetylase family protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFE6_METPP
polysaccharide deacetylase rbh
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:ABM94285.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petrole
cn_combo_scaffold_30_42
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48799..49632
DNA (834bp) protein (278aa)
Methyltransferase type 11 n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VA34_VARPE
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ADU37418.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus
cn_combo_scaffold_30_43
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49629..50822
DNA (1194bp) protein (398aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41)
Beta-ketoacyl synthase domain protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFE7_METPP
Beta-ketoacyl synthase domain protein {ECO:0000313|EMBL:ABM94286.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphi
cn_combo_scaffold_30_44
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50914..51720
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFE8_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM94287.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM
cn_combo_scaffold_30_45
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51717..52169
DNA (453bp) protein (151aa)
Potential 3-hydroxydecyl-(Acyl carrier protein) dehydratase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFE9_METPP
potential 3-hydroxydecyl-(acyl carrier protein) dehydratase
Potential 3-hydroxydecyl-(Acyl carrier protein) dehydratase {ECO:0000313|EMBL:ABM94288.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="M
cn_combo_scaffold_30_46
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52166..52924
DNA (759bp) protein (253aa)
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase FabG {ECO:0000313|EMBL:EWS53886.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EWS53886.1};; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkhol
3-oxoacyl-(ACP) reductase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFF0_METPP
cn_combo_scaffold_30_47
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52997..53476
DNA (480bp) protein (160aa)
Conserved hypothetical signal peptide protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SI65_METPP
Uncharacterized protein {ECO:0000313|EMBL:KDB53685.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans D
signal peptide protein
cn_combo_scaffold_30_48
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53620..54477
DNA (858bp) protein (286aa)
Conserved hypothetical signal peptide protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SI66_METPP
Uncharacterized protein {ECO:0000313|EMBL:KFC65895.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
signal peptide protein
cn_combo_scaffold_30_49
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54497..54793)
DNA (297bp) protein (99aa)
Uncharacterized protein n=2 Tax=Acidovorax RepID=A1W9R4_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM42989.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain
cn_combo_scaffold_30_50
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54865..56064)
DNA (1200bp) protein (400aa)
NnrS family protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TQ93_ALIDB
nnrs family protein
NnrS family protein {ECO:0000313|EMBL:ADV00135.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitri
cn_combo_scaffold_30_51
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56211..57005)
DNA (795bp) protein (265aa)
Putative glycosyltransferase, family 2 n=1 Tax=Variovorax paradoxus B4 RepID=T1XAK6_VARPD
putative glycosyltransferase, family 2
Putative glycosyltransferase, family 2 {ECO:0000313|EMBL:AGU49962.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov
cn_combo_scaffold_30_52
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57002..57826)
DNA (825bp) protein (275aa)
Acyltransferase, putative n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFF2_METPP
acyltransferase
2-acyl-glycerophospho-ethanolamine acyltransferase {ECO:0000313|EMBL:EWS59417.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibi
cn_combo_scaffold_30_53
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57813..58730)
DNA (918bp) protein (306aa)
Putative outer membrane protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFF3_METPP
MltA-interacting protein MipA {ECO:0000313|EMBL:EWS53889.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
outer membrane protein
cn_combo_scaffold_30_54
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58817..59605
DNA (789bp) protein (263aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VAY4_VARPE
Variovorax paradoxus strain MEDvA23 contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ31754.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
phosphoesterase pa-phosphatase-like protein
cn_combo_scaffold_30_55
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59602..59850
DNA (249bp) protein (83aa)
phosphopantetheine-binding Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
cn_combo_scaffold_30_56
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59934..61160
DNA (1227bp) protein (409aa)
beta-ketoacyl synthase n=1 Tax=Variovorax paradoxus RepID=UPI00037F27D2
beta-ketoacyl synthase
Beta-ketoacyl synthase {ECO:0000313|EMBL:ACS18496.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (s
cn_combo_scaffold_30_57
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61217..63268
DNA (2052bp) protein (684aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016648};; Glutaminyl-tRNA synthetase {ECO:
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000371F37E
glutamyl-trna synthetase (partial sequence n terminus) protein
cn_combo_scaffold_30_58
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63361..63855
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003816266
DUF3016 domain-containing protein {ECO:0000313|EMBL:ELX12329.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Ja
putative uncharacterized protein
cn_combo_scaffold_30_59
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64145..64609
DNA (465bp) protein (155aa)
fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; R
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HW13_RUBGI
cn_combo_scaffold_30_60
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64654..65589)
DNA (936bp) protein (312aa)
membrane protein n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00036571D7
Putative membrane protein yedI {ECO:0000313|EMBL:EGK70019.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methylove
membrane protein
Displaying items 31-60 of 320 in total

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