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cn_combo_scaffold_30

Alias: RUB134_1

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Displaying items 1-30 of 320 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_30_1
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

482..1006
DNA (525bp) protein (175aa)
Putative outer membrane protein n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2FXW2_BURVI
Uncharacterized protein {ECO:0000313|EMBL:KIN90662.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
hypothetical protein
cn_combo_scaffold_30_2
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1110..2009)
DNA (900bp) protein (300aa)
putative methyltransferase (EC:2.1.1.-)
Putative methyltransferase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HQY5_RUBGI
arsM; arsenite S-adenosylmethyltransferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
cn_combo_scaffold_30_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2006..2374)
DNA (369bp) protein (123aa)
Transcriptional regulator, ArsR family n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N3Y1_RHOPA
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CAE29002.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="R
cn_combo_scaffold_30_4
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2492..2752)
DNA (261bp) protein (87aa)
Acyl-CoA-binding protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJA7_9BURK
acyl-CoA-binding domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
acyl-CoA-binding domain-containing protein
cn_combo_scaffold_30_5
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2886..4451
DNA (1566bp) protein (522aa)
diacylglycerol O-acyltransferase, putative (EC:2.3.1.20)
diacylglycerol O-acyltransferase, putative (EC:2.3.1.20) Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
Diacylglycerol O-acyltransferase, putative n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HMF4_RUBGI
cn_combo_scaffold_30_6
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4621..5265
DNA (645bp) protein (215aa)
Uncharacterized protein {ECO:0000313|EMBL:KDB51694.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans D
cn_combo_scaffold_30_7
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5356..7524
DNA (2169bp) protein (723aa)
indolepyruvate ferredoxin subunit alpha n=1 Tax=Caldimonas manganoxidans RepID=UPI00037B36C0
Indolepyruvate ferredoxin oxidreductase, alpha/beta subunit {ECO:0000313|EMBL:EHR72458.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiale
indolepyruvate ferredoxin oxidoreductase subunit alpha
cn_combo_scaffold_30_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7568..9094
DNA (1527bp) protein (509aa)
Putative indolepyruvate oxidoreductase subunit B n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UV97_VARPE
indolepyruvate oxidoreductase subunit b
Putative indolepyruvate oxidoreductase subunit B {ECO:0000313|EMBL:ADU38691.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" sourc
cn_combo_scaffold_30_9
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9216..9680)
DNA (465bp) protein (155aa)
Universal stress protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VKC9_POLNA
uspA; UspA domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
UspA domain-containing protein
cn_combo_scaffold_30_10
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9771..10433)
DNA (663bp) protein (221aa)
TetR family transcriptional regulator n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTR0_9BURK
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:EGJ11728.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilytic
cn_combo_scaffold_30_11
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10505..11449
DNA (945bp) protein (315aa)
ABC transporter related protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HMF7_RUBGI
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:BAL94194.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain
cn_combo_scaffold_30_12
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11446..12207
DNA (762bp) protein (254aa)
ABC-2 type transporter n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTR2_9BURK
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 =
putative ABC transporter permease/ATP-binding protein
cn_combo_scaffold_30_13
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12241..12849
DNA (609bp) protein (203aa)
clpP; ATP-dependent Clp protease, protease subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-R
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTR3_9BURK
cn_combo_scaffold_30_14
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12855..13106
DNA (252bp) protein (84aa)
Putative transcriptional regulator, BolA superfamily n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQ41_9BURK
Putative transcriptional regulator, BolA superfamily {ECO:0000313|EMBL:EHR73260.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacte
putative DNA-binding transcriptional regulator
cn_combo_scaffold_30_15
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13103..13750
DNA (648bp) protein (216aa)
hisG; ATP phosphoribosyltransferase HisG (EC:2.4.2.17)
ATP phosphoribosyltransferase n=2 Tax=Rubrivivax RepID=I0HMG2_RUBGI
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; E
cn_combo_scaffold_30_16
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13747..15060
DNA (1314bp) protein (438aa)
hisD; histidinol dehydrogenase HisD (EC:1.1.1.23)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
Histidinol dehydrogenase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HMG3_RUBGI
cn_combo_scaffold_30_17
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15256..15978
DNA (723bp) protein (241aa)
Transcriptional regulator, GntR family n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P605_AROAE
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CAI07256.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatole
cn_combo_scaffold_30_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15975..17180
DNA (1206bp) protein (402aa)
Thiolase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07LN0_RHOP5
beta-oxoacyl-CoA thiolase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
thiolase
cn_combo_scaffold_30_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17201..18793
DNA (1593bp) protein (531aa)
feruloyl-CoA synthetase n=1 Tax=Azoarcus toluclasticus RepID=UPI00036593AF
fcs; ADP-producing CoA ligase, feruloyl-CoA synthetase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
fcs; ADP-producing CoA ligase, feruloyl-CoA synthetase
cn_combo_scaffold_30_20
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18790..20895
DNA (2106bp) protein (702aa)
hydantoin utilization protein A n=1 Tax=Azoarcus toluclasticus RepID=UPI000377D2B4
Hydantoin utilization protein A {ECO:0000313|EMBL:CAI07259.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum arom
hyuA; hydantoin utilization protein A
cn_combo_scaffold_30_21
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20911..22623
DNA (1713bp) protein (571aa)
hydantoin utilization protein B n=1 Tax=Azoarcus toluclasticus RepID=UPI000380B546
hyuB; hydantoin utilization protein B
Hydantoin utilization protein B {ECO:0000313|EMBL:CAI07261.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum arom
cn_combo_scaffold_30_22
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22620..23762
DNA (1143bp) protein (381aa)
acyl-CoA dehydrogenase n=1 Tax=Azoarcus toluclasticus RepID=UPI000380CE81
acyl-CoA dehydrogenase
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:CAI07262.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum arom
cn_combo_scaffold_30_23
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23759..24157
DNA (399bp) protein (133aa)
Methylmalonyl-CoA mutase, C-terminal domain/subunit (Cobalamin-binding) n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5Z8_AROAE
SbmB; methylmalonyl-CoA mutase C-terminal domain-containing protein
Methylmalonyl-CoA mutase, C-terminal domain/subunit (Cobalamin-binding) {ECO:0000313|EMBL:CAI07263.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae;
cn_combo_scaffold_30_24
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24154..25785
DNA (1632bp) protein (544aa)
sbmA; methylmalonyl-CoA mutase subunit alpha; K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
methylmalonyl-CoA mutase n=1 Tax=Azoarcus toluclasticus RepID=UPI000365E8C4
sbmA; methylmalonyl-CoA mutase subunit alpha
cn_combo_scaffold_30_25
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25782..26657
DNA (876bp) protein (292aa)
Medium FAD-binding subunit of molybdenum enzyme n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZPQ6_9PROT
Medium FAD-binding subunit of molybdenum enzyme {ECO:0000313|EMBL:EME69282.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirill
medium FAD-binding subunit of molybdenum enzyme
cn_combo_scaffold_30_26
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26638..27129
DNA (492bp) protein (164aa)
2Fe-2S iron-sulfur cluster binding domain-containing protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Y8A0_9PROT
2Fe-2S iron-sulfur cluster binding domain-containing protein {ECO:0000313|EMBL:EME69281.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; M
2Fe-2S iron-sulfur cluster binding domain-containing protein
cn_combo_scaffold_30_27
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27181..29541
DNA (2361bp) protein (787aa)
Molybdopterin binding aldehyde oxidase and xanthine dehydrogenase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z4I9_9PROT
Molybdopterin binding aldehyde oxidase and xanthine dehydrogenase {ECO:0000313|EMBL:EME69280.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillace
large subunit of molybdenum enzyme
cn_combo_scaffold_30_28
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29548..29799
DNA (252bp) protein (84aa)
Molybdenum cofactor biosynthesis protein D n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3A9U5_9PROT
Molybdenum cofactor biosynthesis protein D {ECO:0000313|EMBL:EME69279.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;"
molybdopterin-converting factor subunit 1
cn_combo_scaffold_30_29
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29833..31035
DNA (1203bp) protein (401aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07LN7_RHOP5
L-carnitine dehydratase/bile acid-inducible protein F Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
L-carnitine dehydratase/bile acid-inducible protein F
cn_combo_scaffold_30_30
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31115..33178
DNA (2064bp) protein (688aa)
Fusion of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P607_AROAE
fusion of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase Tax=CG_Rhodocyc_01
fusion of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase
Displaying items 1-30 of 320 in total

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