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cn_combo_scaffold_23

Alias: RUB134_2

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Displaying items 61-90 of 292 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_23_61
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78020..79168
DNA (1149bp) protein (383aa)
dacC; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LU72_9BURK
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EGJ11890.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatily
cn_combo_scaffold_23_62
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79251..80129
DNA (879bp) protein (293aa)
putative aminotransferase (EC:2.6.1.-)
Putative aminotransferase {ECO:0000313|EMBL:BAL97745.1}; EC=2.6.1.- {ECO:0000313|EMBL:BAL97745.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" s
Putative aminotransferase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXK8_RUBGI
cn_combo_scaffold_23_63
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80132..80407
DNA (276bp) protein (92aa)
UPF0250 protein RBXJA2T_16237 n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LU70_9BURK
UPF0250 protein X805_14110 {ECO:0000256|HAMAP-Rule:MF_00659}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. n
hypothetical protein
cn_combo_scaffold_23_64
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80429..80869)
DNA (441bp) protein (147aa)
Endoribonuclease YbeY {ECO:0000255|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00009};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium
Endoribonuclease YbeY n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=YBEY_METPP
hypothetical protein
cn_combo_scaffold_23_65
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80866..81936)
DNA (1071bp) protein (357aa)
Putative phoH-like protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LU81_9BURK
Putative phoH-like protein {ECO:0000313|EMBL:EGJ11899.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = AT
hypothetical protein
cn_combo_scaffold_23_66
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82090..84021
DNA (1932bp) protein (644aa)
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXL9_RUBGI
sensor signal transduction histidine kinase
Periplasmic sensor signal transduction histidine kinase {ECO:0000313|EMBL:BAL97756.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubriv
cn_combo_scaffold_23_67
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84071..84721
DNA (651bp) protein (217aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Rubrivivax gelatinosus S1 RepID=L8BAH6_RUBGE
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:CCF78734.1}; TaxID=1138313 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubriviv
LuxR family two component transcriptional regulator
cn_combo_scaffold_23_68
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84769..85983)
DNA (1215bp) protein (405aa)
beta-ketoadipyl CoA thiolase (EC:2.3.1.9)
Beta-ketoadipyl CoA thiolase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y4M8_LEPCP
probable succinyl-CoA:3-ketoacid-coenzyme A transferase, mitochondrial-like Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
cn_combo_scaffold_23_69
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86177..87502
DNA (1326bp) protein (442aa)
Putative HD-GYP hydrolase domain containing protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXN5_RUBGI
putative HD-GYP hydrolase domain containing protein
Putative HD-GYP hydrolase domain containing protein {ECO:0000313|EMBL:BAL97772.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax
cn_combo_scaffold_23_70
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87543..89630
DNA (2088bp) protein (696aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQ80_9BURK
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
cn_combo_scaffold_23_71
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89715..90053
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LU95_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ11913.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC
hypothetical protein
cn_combo_scaffold_23_72
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90064..93453)
DNA (3390bp) protein (1130aa)
Pyrrolo-quinoline quinone n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LU92_9BURK
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:EGJ11910.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATC
pilY1; Tfp pilus assembly protein, tip-associated adhesin PilY1 rbh
cn_combo_scaffold_23_73
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93500..94027)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LU91_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ11909.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC
hypothetical protein
cn_combo_scaffold_23_74
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94042..95118)
DNA (1077bp) protein (359aa)
Putative fimbrial biogenesis protein PilW n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXM7_RUBGI
pilW; putative fimbrial biogenesis protein PilW
Putative fimbrial biogenesis protein PilW {ECO:0000313|EMBL:BAL97764.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinos
cn_combo_scaffold_23_75
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95108..95509)
DNA (402bp) protein (134aa)
Tfp pilus assembly protein PilV n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQ73_9BURK
Tfp pilus assembly protein PilV {ECO:0000313|EMBL:EHR73292.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
pilV; putative type IV pilus modification protein PilV
cn_combo_scaffold_23_76
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95548..96060)
DNA (513bp) protein (171aa)
Pre-pilin like leader sequence n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LU88_9BURK
Pre-pilin like leader sequence {ECO:0000313|EMBL:EGJ11906.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2
type IV pilus transmembrane FimT-like protein
cn_combo_scaffold_23_77
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96048..96521)
DNA (474bp) protein (158aa)
Type IV pilus biogenesis protein PilE n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LU87_9BURK
Type IV pilus biogenesis protein PilE {ECO:0000313|EMBL:EGJ11905.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilytic
pilE; fimbrial protein, type IV pilin, PilE
cn_combo_scaffold_23_78
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96772..97839)
DNA (1068bp) protein (356aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000255|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_00016};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria;
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=RUVB_METPP
cn_combo_scaffold_23_79
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97970..98311
DNA (342bp) protein (114aa)
Lipoprotein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LSV5_9BURK
Lipoprotein {ECO:0000313|EMBL:EGJ11423.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
cn_combo_scaffold_23_80
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98438..100645
DNA (2208bp) protein (736aa)
TonB-dependent siderophore receptor n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMD7_ACCPU
TonB-dependent siderophore receptor
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ACV37215.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulib
cn_combo_scaffold_23_81
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

100648..102276
DNA (1629bp) protein (543aa)
hypothetical protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI000311DBEE
hypothetical protein
Sodium:proline symporter {ECO:0000313|EMBL:CKG75063.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugino
cn_combo_scaffold_23_82
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102273..102746
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Thauera sp. 63 RepID=N6Y3F8_9RHOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENO74599.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
cn_combo_scaffold_23_83
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102833..103639
DNA (807bp) protein (269aa)
enoyl-CoA hydratase/isomerase; K15866 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2E9W9_9BURK
cn_combo_scaffold_23_84
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103676..104254)
DNA (579bp) protein (193aa)
rubA; holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.4.12)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LU84_9BURK
cn_combo_scaffold_23_85
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104411..105580
DNA (1170bp) protein (390aa)
4-hydroxybenzoate 3-monooxygenase (EC:1.14.13.2)
4-hydroxybenzoate 3-monooxygenase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WR04_9BURK
4-hydroxybenzoate 3-monooxygenase {ECO:0000313|EMBL:EHR73302.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacte
cn_combo_scaffold_23_86
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105666..106658
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J3D132_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL82539.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="P
hypothetical protein
cn_combo_scaffold_23_87
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106655..108025
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J2LBL6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL82538.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="P
fumarate reductase/succinate dehydrogenase flavoprotein-like protein
cn_combo_scaffold_23_88
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108047..108718
DNA (672bp) protein (224aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000
Octanoyltransferase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y5B2_RAMTT
lipB; lipoate-protein ligase B
cn_combo_scaffold_23_89
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108730..110280)
DNA (1551bp) protein (517aa)
Putative methyl-accepting chemotaxis protein with PAS/Pac sensor n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HVQ3_RUBGI
mcp; putative methyl-accepting chemotaxis protein with PAS/Pac sensor rbh
Putative methyl-accepting chemotaxis protein with PAS/Pac sensor {ECO:0000313|EMBL:BAL97090.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" sourc
cn_combo_scaffold_23_90
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110440..111219)
DNA (780bp) protein (260aa)
PpiC-type peptidyl-prolyl cis-trans isomerase; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] Tax=GWA2_Curvibacter_64_110_curated
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TJY0_ACIAC
PpiC-type peptidyl-prolyl cis-trans isomerase
Displaying items 61-90 of 292 in total

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